Gene Rpal_4053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4053 
SymbolmurE 
ID6411736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4350352 
End bp4351809 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content69% 
IMG OID642713935 
ProductUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 
Protein accessionYP_001993024 
Protein GI192292419 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.112267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTC GCGATCTCTT CAGCGCCGAG GCCGACATCG CCGCGCCAGC GGCCGCTCTC 
GCCATCGGCG GGCTCGCCGT CGACAGCCGC GCGGTGAAGC CGGGCGACCT GTTCTTCGCG
CTCGCCGGGG CCAAGACCGA CGGGGCGCGG TTCGTCGCGG CGGCGGTCGC GACAGGGGCG
GTGGCGGTTG CGGGCGAGCA CCGGCCGGAG GGCGACCTTG CGGTGCCGTT CGTGCAGCTG
TCCAATGCGC GCCTGGCGCT GGCACAGGCC GCGGCGCGGT TCTATCCGCG CCAGCCCGAG
GTGATCGCGG CCGTCACCGG CACCAGTGGC AAAACCTCGG TCGCGGCCTT CACCCGGCAA
ATCTGGCAGC GGCTCGGCCA TGCCTCCGCC AGCATCGGCA CCATTGGTCT CGTCACCCCG
ACGCGCAGCG TGTACGGCTC GCTGACCACG CCGGACCCGA TCGCGCTGCA TCGCTCGCTT
GATGAAATCG CCCGCGAAGG CATCACCCAT CTGGCGCTTG AAGCCTCGTC GCATGGGCTG
GATCAGTTCC GGCTCGACGG CGTTCGCGTC GCGGCAGGCG GCTTCACCAA TTTGTCGCGC
GACCACATGG ATTATCACCC CACCGTCGCG CACTATCTCA ATGCCAAGTT GCGGCTGTTC
CGCAATCTGG TGCAGGACGG CGGCGCGGCA GTGATCTCCG CCGATCACGA CTGTTCGGCC
CAAGTGATCG AAGCGGCGGG CGCCCGCGGC CTGCGGCTGA TCACGATCGG CCGCAACGGT
GATCCGGGCG CAGGCATCAA GCTGATCGAC GCCACGGTCG AAGGCTTCGC GCAACAGCTC
ACGGTCGAGC ACGCGGGGAA GCGGCATCGC ATCAAACTGC CGCTGGTCGG CGAATTCCAG
ATCGAGAACG CGCTGGTCGC GGCAGGTCTG GTGATCGGCA CCGGCGGCGA CGCGGCGGCG
AGCTTCGCCG CGCTCGAACA TCTCGAAGGT GCGCCGGGCC GGCTCGATCT GGTTGGCGCC
CGCAACGGCG CACCGGTGTT CGTCGACTAC GCGCACAAGC CCGATGCGCT CGCCAAAACC
CTGCAGGCGC TGCGTCCCTA TGCCAAGCGC AAGCTGGTCG TGGTGTTCGG CGCCGGCGGT
GATCGCGACT CCGGCAAGCG GCCGCTGATG GGCGCGATCG CAGCTGAGAA CGCCGACGTG
GTGATTATCA CCGACGACAA TCCGCGCAGT GAAGATCCCG CCACGATCCG CTCCGCCATT
CTTGCGGCTG CGCCCGGCGC GCGCGAGATC GGCGATCGCG CCGAGGCGAT CCGCACAGCG
ATCGGCGAGC TGCAGCCGGG TGATGCGCTG GTGATCGCCG GTAAGGGCCA CGAAACCGGG
CAGATCGTGG GCGACCGCGT GCTGCATTTC AGCGACCACG ACGCCGCGAA TGCGGCGCTA
TCAGCGAGCG CCGCATGA
 
Protein sequence
MKLRDLFSAE ADIAAPAAAL AIGGLAVDSR AVKPGDLFFA LAGAKTDGAR FVAAAVATGA 
VAVAGEHRPE GDLAVPFVQL SNARLALAQA AARFYPRQPE VIAAVTGTSG KTSVAAFTRQ
IWQRLGHASA SIGTIGLVTP TRSVYGSLTT PDPIALHRSL DEIAREGITH LALEASSHGL
DQFRLDGVRV AAGGFTNLSR DHMDYHPTVA HYLNAKLRLF RNLVQDGGAA VISADHDCSA
QVIEAAGARG LRLITIGRNG DPGAGIKLID ATVEGFAQQL TVEHAGKRHR IKLPLVGEFQ
IENALVAAGL VIGTGGDAAA SFAALEHLEG APGRLDLVGA RNGAPVFVDY AHKPDALAKT
LQALRPYAKR KLVVVFGAGG DRDSGKRPLM GAIAAENADV VIITDDNPRS EDPATIRSAI
LAAAPGAREI GDRAEAIRTA IGELQPGDAL VIAGKGHETG QIVGDRVLHF SDHDAANAAL
SASAA