Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4053 |
Symbol | murE |
ID | 6411736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4350352 |
End bp | 4351809 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642713935 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_001993024 |
Protein GI | 192292419 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.112267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTTC GCGATCTCTT CAGCGCCGAG GCCGACATCG CCGCGCCAGC GGCCGCTCTC GCCATCGGCG GGCTCGCCGT CGACAGCCGC GCGGTGAAGC CGGGCGACCT GTTCTTCGCG CTCGCCGGGG CCAAGACCGA CGGGGCGCGG TTCGTCGCGG CGGCGGTCGC GACAGGGGCG GTGGCGGTTG CGGGCGAGCA CCGGCCGGAG GGCGACCTTG CGGTGCCGTT CGTGCAGCTG TCCAATGCGC GCCTGGCGCT GGCACAGGCC GCGGCGCGGT TCTATCCGCG CCAGCCCGAG GTGATCGCGG CCGTCACCGG CACCAGTGGC AAAACCTCGG TCGCGGCCTT CACCCGGCAA ATCTGGCAGC GGCTCGGCCA TGCCTCCGCC AGCATCGGCA CCATTGGTCT CGTCACCCCG ACGCGCAGCG TGTACGGCTC GCTGACCACG CCGGACCCGA TCGCGCTGCA TCGCTCGCTT GATGAAATCG CCCGCGAAGG CATCACCCAT CTGGCGCTTG AAGCCTCGTC GCATGGGCTG GATCAGTTCC GGCTCGACGG CGTTCGCGTC GCGGCAGGCG GCTTCACCAA TTTGTCGCGC GACCACATGG ATTATCACCC CACCGTCGCG CACTATCTCA ATGCCAAGTT GCGGCTGTTC CGCAATCTGG TGCAGGACGG CGGCGCGGCA GTGATCTCCG CCGATCACGA CTGTTCGGCC CAAGTGATCG AAGCGGCGGG CGCCCGCGGC CTGCGGCTGA TCACGATCGG CCGCAACGGT GATCCGGGCG CAGGCATCAA GCTGATCGAC GCCACGGTCG AAGGCTTCGC GCAACAGCTC ACGGTCGAGC ACGCGGGGAA GCGGCATCGC ATCAAACTGC CGCTGGTCGG CGAATTCCAG ATCGAGAACG CGCTGGTCGC GGCAGGTCTG GTGATCGGCA CCGGCGGCGA CGCGGCGGCG AGCTTCGCCG CGCTCGAACA TCTCGAAGGT GCGCCGGGCC GGCTCGATCT GGTTGGCGCC CGCAACGGCG CACCGGTGTT CGTCGACTAC GCGCACAAGC CCGATGCGCT CGCCAAAACC CTGCAGGCGC TGCGTCCCTA TGCCAAGCGC AAGCTGGTCG TGGTGTTCGG CGCCGGCGGT GATCGCGACT CCGGCAAGCG GCCGCTGATG GGCGCGATCG CAGCTGAGAA CGCCGACGTG GTGATTATCA CCGACGACAA TCCGCGCAGT GAAGATCCCG CCACGATCCG CTCCGCCATT CTTGCGGCTG CGCCCGGCGC GCGCGAGATC GGCGATCGCG CCGAGGCGAT CCGCACAGCG ATCGGCGAGC TGCAGCCGGG TGATGCGCTG GTGATCGCCG GTAAGGGCCA CGAAACCGGG CAGATCGTGG GCGACCGCGT GCTGCATTTC AGCGACCACG ACGCCGCGAA TGCGGCGCTA TCAGCGAGCG CCGCATGA
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Protein sequence | MKLRDLFSAE ADIAAPAAAL AIGGLAVDSR AVKPGDLFFA LAGAKTDGAR FVAAAVATGA VAVAGEHRPE GDLAVPFVQL SNARLALAQA AARFYPRQPE VIAAVTGTSG KTSVAAFTRQ IWQRLGHASA SIGTIGLVTP TRSVYGSLTT PDPIALHRSL DEIAREGITH LALEASSHGL DQFRLDGVRV AAGGFTNLSR DHMDYHPTVA HYLNAKLRLF RNLVQDGGAA VISADHDCSA QVIEAAGARG LRLITIGRNG DPGAGIKLID ATVEGFAQQL TVEHAGKRHR IKLPLVGEFQ IENALVAAGL VIGTGGDAAA SFAALEHLEG APGRLDLVGA RNGAPVFVDY AHKPDALAKT LQALRPYAKR KLVVVFGAGG DRDSGKRPLM GAIAAENADV VIITDDNPRS EDPATIRSAI LAAAPGAREI GDRAEAIRTA IGELQPGDAL VIAGKGHETG QIVGDRVLHF SDHDAANAAL SASAA
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