| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4028 |
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| Symbol | |
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| ID | 6411711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4316565 |
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| End bp | 4318844 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713910 |
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| Product | hypothetical protein |
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| Protein accession | YP_001992999 |
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| Protein GI | 192292394 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAC CGATCCTCGC CGCGAGCCCG AACAGCCCGG CGCGCAACCG GCAGATCCTG
ATCGTTTATA CCATCGCGAT CTTCGTCAGC GCCCTGCTGC TGTTCTCGGT GCAGCCGCTG
TTCACCAAGA TGGTGCTGCC GCGGCTCGGC GGCTCGCCGG CGGTGTGGTC GGTGGCGATG
GTGTTCTTCC AGTCGCTGCT GCTGGCCGGC TATGCCTATG CGCATGGGCT GAGCCGGTTT
GCCGACCGCC GCGTTTCGGT CGTGGTCCAC CTCCTGCTGC TGGTCGTGGC GCTGCTGACG
CTGCCGCTGG CGATCGCGAC CGGCTGGGGC ACGCCGCCGG CAAGCGGCTA CGAGCTGTGG
CTGCTCGGCC TGTTCGCGGT GTCGATCGGC CTGCCGTTCT TCGCGCTCGC CGCCAACAAT
CCGCTGCTGC AGGCGTGGTT CGTTCGCACC GGCCATCCCG ACGGCCGCGA TCCTTACTTC
CTGTACGCCG CCTCCAACAT CGGCAGCTTC CTGGCGCTGC TGTCCTATCC GGTGCTGCTC
GAGCCGCTGC TGACACTGCG GCTGCAGAAC CTGATGTGGA CTGCCGGCTA CGGCGTGCTG
ATCCTGCTGA TCGCCGCTTG CGGCGTGCTG CTGCTGCGCG CGCCGGCCAC CGCTTCAGCC
GATAGCGCCG CAAGCGACAG CGACGCACCG GCGCCGGCAT GGCTGACGGT GGCGCGCTGG
GTGTTCCTCG CCGCGGTGCC GTCCGGCCTG CTGATCGCCG TCACCGCGCA CATCTCCACC
GATGTCGCCG CGGCGCCGCT GCTGTGGGTA CTGCCGCTGT CGCTGTATCT GCTCACCTGG
GTGCTGGTGT TCCAGTCGCG GCCGCTGCTG CCGCACAAAT GGATGCTGGC GCTGCAGCCG
ATCGCGATCG CGGTGATCGT GGTGCTGCTG GCCTATTCGG CGTCCGAGCA CAATCTGCTG
CTGACGCTCG GCGGACACCT GGTCTGCTTC TTCATCATCG CGATGGCCTG CCATGGCGAA
CTGGCGCGGA CGCGGCCGCC GGCGCGGTAT CTCACCGGCT TCTATGTGGC GCTGTCGTTC
GGCGGCATGG TCGGCGGCCT GTTCGCCGGG CTGGTGGCGC CGTACACATT CTCCTGGATC
GCCGAATATC CGATCCTGCT CGCGCTCGCG GTATTGTGCC GGCCACCTTT GCCGGAGCGG
CGACCGCAAT GGTCGCTGGC GATCTGGCTG CTGATCGCTG CGCTGGCGGC GGTGCTGATC
ACCTCGGCGT TCACCTCCGG CAAGCTGCAC GAATGGTTCG CCACCAACCG CGTGCTGCTG
ATCGGCGACG TCGCCGCGCT CGGGGTGTTC ATCGCGGTGG TGCTGCGCGC CGCGCCGGCC
AAGCTGCTCG CCACCGTCGC GCTGGCGTTG GTCTTGATCC GGCTGTACCC GGCCGATGAG
GGGCGGATCG AAACGGTGCG CAGCTTCTTC GGCGTGCATA AGATCCAGGT GACGGCGGAC
GGCCGTTTCC ATGTGCTGTT GCACGGCACC ACGATTCACG GTGCCGAGCG CGTGCTCAAC
GACGACGGCA CGCCGGTCAC CGGGCGGCCG GAGCCGATCT CGTACTATCA CAAGGACGGC
GGCATCGGGC AGGCGATCAC CGCGATCCGC GAGCGCAAGG GCGGCCCGAT CCGCGTCGCG
GTGATCGGGC TCGGCTCCGG CACGCTGACC TGCGCGTCAG CACCGGACGA GCATTGGCGG
TTCTTCGAAA TCGACCAGTC GATGATCGAT ACCGCGCGCG ATCCGAAATA TTTCAGCTTC
GTCAGCAAAT GCGCGCCGGA TTTGCAGCCG GTGGTCGGCG ACGCCCGGCT GACCTTCGCG
CACGAGCCGG ACGGCGCCTA CGACCTGATC ATCGTCGATG CCTATTCGTC GGACGCGATC
CCGATCCACC TCGCCACCCG CGAGGCGATG GCGATCTACC AGGCCAAGCT GGCGCCGCAG
GGGGCGGTGC TGATGCATGT CTCCAACCGC CATCTCGAAC TGGCAAGCGT TGCGGTCGGC
ATTGCAGACG CCAACGGGCT GAAGAGCTGG GTCGCGTCGC AGGATGCCGG CCGCGATGCC
GAGTACATCT TTGCCACCTC GGTGGTGATC TCGGCCCGTC AGGCCGCCGA TATCGGCCGG
CTCGCCGGCA ACGACGACTG GACCCTGACC GCGCCACGCG CCGGCGACCG GGTGTGGACC
GACGACTATT CCAACGTGCT TGGCGCGGTG TGGCGCCGGC TGCGCGACGG CGAGGACTAG
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| Protein sequence | MTEPILAASP NSPARNRQIL IVYTIAIFVS ALLLFSVQPL FTKMVLPRLG GSPAVWSVAM
VFFQSLLLAG YAYAHGLSRF ADRRVSVVVH LLLLVVALLT LPLAIATGWG TPPASGYELW
LLGLFAVSIG LPFFALAANN PLLQAWFVRT GHPDGRDPYF LYAASNIGSF LALLSYPVLL
EPLLTLRLQN LMWTAGYGVL ILLIAACGVL LLRAPATASA DSAASDSDAP APAWLTVARW
VFLAAVPSGL LIAVTAHIST DVAAAPLLWV LPLSLYLLTW VLVFQSRPLL PHKWMLALQP
IAIAVIVVLL AYSASEHNLL LTLGGHLVCF FIIAMACHGE LARTRPPARY LTGFYVALSF
GGMVGGLFAG LVAPYTFSWI AEYPILLALA VLCRPPLPER RPQWSLAIWL LIAALAAVLI
TSAFTSGKLH EWFATNRVLL IGDVAALGVF IAVVLRAAPA KLLATVALAL VLIRLYPADE
GRIETVRSFF GVHKIQVTAD GRFHVLLHGT TIHGAERVLN DDGTPVTGRP EPISYYHKDG
GIGQAITAIR ERKGGPIRVA VIGLGSGTLT CASAPDEHWR FFEIDQSMID TARDPKYFSF
VSKCAPDLQP VVGDARLTFA HEPDGAYDLI IVDAYSSDAI PIHLATREAM AIYQAKLAPQ
GAVLMHVSNR HLELASVAVG IADANGLKSW VASQDAGRDA EYIFATSVVI SARQAADIGR
LAGNDDWTLT APRAGDRVWT DDYSNVLGAV WRRLRDGED
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