| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4021 |
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| Symbol | |
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| ID | 6411704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4309177 |
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| End bp | 4311723 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713903 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001992992 |
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| Protein GI | 192292387 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC CGACCAAGCG CCAGCCTCTC GACATCTCCA GCTATCAGCC CACCGCCGGC
GGCATCGCCG CGCGCGCCCG CGCCGCGGCC GGCCCGGCCT ATCTGTCCGG CCTCAACCCG
GAGCAGCGCG AGGCGGTCGA GACGCTGGAT GGCCCGGTGC TGGTGCTGGC CGGCGCCGGC
ACCGGCAAGA CCCGCGTGCT GACCACGCGG ATCGCCCACA TCCTCTCCAC CGGCCGCGCC
CGGCCCGCCG AAATCCTGTC GGTGACCTTC ACCAACAAGG CCGCGCGCGA GATGAAGCTG
CGGCTCGGCC AGATGCTCGG CCAGGCGGTC GAAGGCATGC CGTGGCTCGG CACCTTCCAT
TCGATCGGCG GCCGCATCCT GCGCTATCAT GCCGAGCTGG TGCAGCTCAC CTCGAACTTC
ACGGTGCTCG ACACCGACGA CCAGATCCGG CTGCTGAAGC AACTGCTCGC TGCCGACAAT
ATCGACGACA AACGCTGGCC GGCGCGGATG CTGGCCGGGC TGATCGACGG CTGGAAGAAC
CGCGGCCTGA CGCCGTCGCA GGTGCCGGCC GGCGAAGCCG CGATGTTCGG CAACGGCCGC
GGCGGCAAGC TCTATGCGCA GTATCAGGAG CGGCTGAAGA TCCTCAACGC CGCCGACTTC
GGCGATCTGC TCTTGGAGAA CATCCGCCTG TTCCGCGAAC ACCCCGACGT GCTGCGGAGT
TACCAGAACC GCTTCAAGTT CATCCTGGTC GACGAGTATC AGGACACGAA CGTGGCGCAG
TATATGTGGC TGCGGCTCTT GTCGCAGACG CCTTCCTCAT CGTCATTGCC GGGCTCGACC
CGGCAATCCA TCTCTTCACA AGAAGATGGA TCACCGGGTC TCGCCGCTTC GCGGCGGCCC
GGTGATGACG TCGAGACGAG TGGCAACGTC GTTGCCTCCA CCTCCGCCCC GCCCAAAAAC
ATCTGCTGCG TCGGCGACGA TGATCAGTCG ATCTATGGCT GGCGCGGCGC GGAGGTCGAC
AACATCCTGC GTTTCGACCA CGACTTCCCC GGCGCCAAGG TCATTCGCCT GGAGCGCAAC
TATCGCTCGA CCGGCCACAT CCTCGCCGCC GCCTCGCATC TGATCGCCCA CAACGAAGGC
CGGCTCGGCA AGACGCTGCG CACCGAGGAT GTCGACGGCG AGATGGTCAC CGTCACCGGC
GCCTGGGATT CGGAAGAAGA GGCCCGCGCG ATCGGCGAAG AGATCGAGCA GCTGCAGCGC
CAGGGCCACG CGCTGAACGA GATCGCCATC CTGGTGCGCG CGTCGTTCCA GATGCGCGAG
TTCGAAGACC GCTTCGTCAC GCTCGGCCTG CCCTACCGCG TGATCGGCGG CCCGCGGTTC
TATGAGCGCG CCGAAATCCG CGATGCGCTG GCGTATTTGC GGGTGATCAA CTCGCCGGCC
GACGACCTCG CCTTCGAACG CATCGTCAAC GTGCCGAAGC GCGGCCTCGG CGACGCCACC
GTCCAGATGC TGCACGATCA CGCCCGCAAG CGACGGATTC CGCTGTTCGA GGCGGCGCGG
ATGGTGATCG ACACCGACGA GCTGAAGCCG AAAGCGCGCA GCAGCCTGCG CGGCCTGATC
GAGAATTTCG AACGCTGGCA GGTGCAGCGC GACGCGCTGG CGCATACCGA ACTCGCCGAG
ATCGTGCTCG ACGAGAGCGG CTACACCGAG ATGTGGCAGA AGGATCGCTC CGCCGACGCC
GCCGGCCGGC TGGAGAACCT GAAAGAACTC GTCCGCTCGA TGGAGGAGTT CGAGAATCTG
CAGGGCTTTT TGGAGCACAT CTCGCTGGTG ATGGACCGCG AGGGCGGCGC CGACGAAGAC
GCCGTCAGCG TGATGACGCT GCACTCCGCC AAGGGCCTGG AATTCGAGAC CGTGTTCCTG
CCCGGCTGGG AGGAAGGGCT GTTCCCGCAT CAGCGCGCGC TCGACGAACA GGGCCGCGCC
GGCCTGGAAG AAGAACGCCG CCTCGCCCAT GTCGGCATCA CCCGCGCCCG CAAGCGCGCG
AAGTTGTACT TCGCCACCAA CCGCCGCATC CACGGCACCT GGAACACGAC CATCCCGTCG
CGCTTCCTCG ACGAACTTCC GGCCGCCAAT GTCGAGATCA CCGAGTCGAA AGGCGGCTCC
GGCTGGGGCG GCATGAGCGG CTACGGCCCG TCGCGGTTCG ACAACGTCGA GTCGTTCGGC
TCGAGCTACT CGACACCGGG CTGGCAGCGC GCCCAGGCGC AGCGCGGCCG CAGCGGTGGC
GGCAGCAACG GCGGCCGCAG CGGCGGCTTC GGCGAAAGCA GCTCGTCCTA CTCGTCCGGC
AGCACCCGCC GCGCGCCTTT CACCATCGAA GGCGAACTGG TCGCCAAATC CACCGGCACC
GAGTCGGCGT TCTCGCTGAA GGATCGCGTC TTCCACCAGA AGTTCGGCTA CGGCCACGTC
ACCAAGATCG ACGGCAACAA ACTCACCATC GTGTTCGACA AGGCCGGCGA GAAGAAGGTG
GTCGATAGCT TCGTGGAGCG GGCCTGA
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| Protein sequence | MTDPTKRQPL DISSYQPTAG GIAARARAAA GPAYLSGLNP EQREAVETLD GPVLVLAGAG
TGKTRVLTTR IAHILSTGRA RPAEILSVTF TNKAAREMKL RLGQMLGQAV EGMPWLGTFH
SIGGRILRYH AELVQLTSNF TVLDTDDQIR LLKQLLAADN IDDKRWPARM LAGLIDGWKN
RGLTPSQVPA GEAAMFGNGR GGKLYAQYQE RLKILNAADF GDLLLENIRL FREHPDVLRS
YQNRFKFILV DEYQDTNVAQ YMWLRLLSQT PSSSSLPGST RQSISSQEDG SPGLAASRRP
GDDVETSGNV VASTSAPPKN ICCVGDDDQS IYGWRGAEVD NILRFDHDFP GAKVIRLERN
YRSTGHILAA ASHLIAHNEG RLGKTLRTED VDGEMVTVTG AWDSEEEARA IGEEIEQLQR
QGHALNEIAI LVRASFQMRE FEDRFVTLGL PYRVIGGPRF YERAEIRDAL AYLRVINSPA
DDLAFERIVN VPKRGLGDAT VQMLHDHARK RRIPLFEAAR MVIDTDELKP KARSSLRGLI
ENFERWQVQR DALAHTELAE IVLDESGYTE MWQKDRSADA AGRLENLKEL VRSMEEFENL
QGFLEHISLV MDREGGADED AVSVMTLHSA KGLEFETVFL PGWEEGLFPH QRALDEQGRA
GLEEERRLAH VGITRARKRA KLYFATNRRI HGTWNTTIPS RFLDELPAAN VEITESKGGS
GWGGMSGYGP SRFDNVESFG SSYSTPGWQR AQAQRGRSGG GSNGGRSGGF GESSSSYSSG
STRRAPFTIE GELVAKSTGT ESAFSLKDRV FHQKFGYGHV TKIDGNKLTI VFDKAGEKKV
VDSFVERA
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