| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4017 |
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| Symbol | |
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| ID | 6411700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4302706 |
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| End bp | 4306530 |
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| Gene Length | 3825 bp |
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| Protein Length | 1274 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642713899 |
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| Product | AsmA family protein |
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| Protein accession | YP_001992988 |
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| Protein GI | 192292383 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.43483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGACGA CGCTGCTCGG CCTGGCTATC GCGCTGATCC TGGCGCTGCT CGCCGCGCTG
GTCGGGCCGT ATCTGATCGA CTGGAACCAG TTTCGCACTC CGTTCGAAGC GGAGGCGACG
CGGCTGCTCG GCGCCCAGGT TCGGGTTGCC GGTGCGCTCG ATGCGCGGCT GCTGCCGACG
CCGTCGCTGC GACTGCAGCG TGTGACCGTC GGCGGCGCCA ACGATGCGGG CCGGTTCGCC
GCCGCCAAGC TCGATGTCGA ATTCAGCCTC GGCTCGCTGA TGCGCGGCGA ACTGCGCGCC
GACGAACTGT CGATCAACGG GCTGTCGCTC GATCTCGGGC TCGATCCGCA GGGCCGGCTT
GACTGGCCGG CGGTGGGCTT CTCGAACCTC GCCGCGCTCA CCGTCGACCG GCTCAATCTC
ACCGGCCGGA TCGCGCTGCA CGATGCCGCC AGCCGCAGCA ATCTCGAACT CAGCGACATC
GCGTTCTCCG GCGAGCTGCG CGCGCAAGCC GCGGCGCTGC GCGGCGACGG CAATTTCCTG
CTCGGCGGCC AGCGCTATCC GTTCCGGCTG TCGACCAGCC GCGCGGCGGA TGGCGATGCG
ATCCGGCTGC GCGCCGGGAT CAACCAGGGC GCCGGCGGGA TCGCGGCCGA TCTCGACGGC
TTGGTGAGGT TCGGGCAAAG CCGGCCCCTG TTCGACGGCA CAGCTTCGCT GGCGGCGCTT
GCGGCAGCGA CGGGCGAGAC GCCGCGGACG CCGTGGCGGC TCGCCGCCAA GGTCGAGGCG
GATCCGGCGC TCGCCAAGCT CGATCAGGTC GAGGTCTCCT GGGGCGCTGA CGACCGCGCG
CTGAAGCTGA CCGGCAGCGG CGAAGCGCGG TTCGGCGCTG CGCCGCGGCT CGACGCCAAG
CTGTCGGCGC GGCAGCTCGA TGCCGACCGG CTGCTGGCGA AGCCCGGCGA TGTCGCCCAG
CCCTTGCCCT GGCTGGTGCG GCTGCGCGAT CTGGCGGAGT CGCTGCCGCT GCCGTCGTTG
CTGGCGCGGG TGTCGCTCGA CGCCGATCAG ATCATGATCG GCAACCGGCC GGTCACCGAT
CTCGTCGCCG AACTGCGCGG CGACTCGCAG ACCTGGCAGC TCGAGCGGCT GGAGCTGCGT
GCCCCCGGCG GCACCCGGCT GGCGCTGCGC GGCGGCGCTG GCGCCGCGGA TGCAGCGATC
ACCGGCACGC TCGATCTGTC CGCGACCGAT CCGGATCTGC TCGCCGCTTG GCTGCAGGGC
CGCGCGCCGA CCGCCGGCAG TCTCAGCAAG GCGCTGCGGA TCGCCGGTGG TGTCCGCGCC
GGCTCCGACG CACTGGTGCT CGATCCGCTG ACGGTGCAAA GCGGCGGCGA CACGCTGCGC
GGTCGCTTCG CCTATCGGGC GCGGCGTGAT GATCAGGGGA CGCAGATCGA CGCTGAGCTG
AAGGGCGACA GCGCCGATCT CGACGCGGCG CTGCAATGGG CGCGCACGCT CGCCGGATCT
GACGGCGGCT GGCCGGAGCA GGCCAGCCTC ACGCTCGACC TCGGCAAGCT CAGCGTCGGC
GATCAGGTCT GGCAGCCCGC TGCACTGCGG CTGGCGTACG ATCCGCACCG GATCGCGCTC
GACCGGCTGA AGCTCGGCAC CGCGGGCGGG CTGCTGTTGG AAGGCGACGG CGCCCTCGAC
CGCGACAACG CCACCGGCAG GCTGGCGCTG TCGACGCGGG CGCCATCGCT CGGTCCGATC
GCCGCGGCGA TCGATCCAAT CGCGCCGGCC ATCGCGGCAC GATTGAAGGC GCTGCCGACC
GACCCCGGCG AAGTACGCGC CAAGCTGGCG TTGGCGGTGG AGAAGGCCGG TGCGGTGCGC
GATCACGTCG AAGCCAGCGG CGCGCTCGAC CTTGCCGGCC CGCAACTAAG TGGTCGTTTG
ACCGCAAAGG CGAGCCCGCC TGCTGCTGAT CTGCGCAAGC TCGATGTCGA GGCGCTGACG
CGTCGTGCGC TCCAACTCGA CGGGGAGCTG TCGGCACCGC GTGGTGAGGC GCTGCTGTCG
TTGCTCGGGC TCGACCGCGT CATCGCCGCC GGCGACGGCG CGGCGACGCT GCACGCGTCC
GGCTCCGGCA CGTGGCGAGG CAAGCTGCAA GGCAAAGCCA AGCTGACCGC GGCGCGGCTC
GACGCCGAGG CGAGCGGCGA GGTCGAGCCG TTCGCGGCCG AGCCGAAGGC GTCGCTGTCG
CTCAATGCGC GCAAGCTCGA CCTGGCGCCG CTGTTCGATC TGCCGCCGTC CGTCGCAAAC
GAAGCGCCGC TGTCGCTCTC GACCCAGCTG GCGGTCGCGG GCAGCAAATG GACCTTCAAA
GACATCGATG CCGGCATCGC CGGCTCGCGG CTGCGCGGCC GGTTGGCGCT GACCCGGGGC
GAGACCGCCG AACTCGACGG CGAAGCGGGG ATCGACACGC TGCCGCTGGG ACCGGCGCTG
CAACTCGCGC TCGGAGCCGC CGGTCGTCCC GCCGACGAGC CGCTCGGGCA GGGCTGGCTG
CGCGGTTGGC GCGGTAAGAT CGCGTTCCAG GCGGTGCGCG CCGAACTGCC GGGCGGCAGC
GAACTGCAAC CGCTGCGCGG GGTGGTGCGC AGCGACGGGC GATCGCTGAC GCTCGACAGC
AGTGGCAAGC TTGGCGGCGG CGACGCCAAG GCGGTGCTGA CCGCCAAACT GGTCGAGGCC
GGTGTGGCGC TCGACGCGCA GCTCACCTTG AAGGATGCCG ACGCCGCAGC GCTGCGCGAC
GGCACGCTTG CCCTGCCGCC GGGGAGGCTG TCGCTGCAAG GAACGCTGGC GAGCAGCGGT
CGCAGCGCCT CGGCGCTCGC CGGCGCGCTG TCCGGCGGCG GCACAGTGAC GCTGTCGCAG
GCGGCGATCT CAGGGCTCGA TCCGAGCGCC TTTGCCGTCG CGATCCGCGC CGCCGATCAA
GGACAGCCGA TCGATGCCGA CCATCTGGCC AAGCTGATCG AGCCGGCGCT GAAGGCCGGG
CCGCTGAAGG TCGACAGCGC GCAGTTTCCG ATCAGTGTCG GCGACGGCCG CCTGAAGCTG
GCGCCGACCA CGCTGCAGGC CAAGGACGCG CGCGCGGTAG TGTCGGGGGG CTACGATGTG
GCGGCGGGGC AGGCCGATGT GCGGGTGACG CTGATTTCGA CCGAGCCGGC CCAGGAGTTG
CCACCGGAGA TCCGGGTGTT CGCGGCCGGA CCGCCGGACC GGATGGAGTG GTCTGTCGAT
CTGTCAGGAT TGTCGTCGTG GCTGTCGATC CGCCGGATCG ATCGCGAGAC CCGCAAGCTG
CAGATGCTGG AACAGGGGGG CAAACCGCCG GTCGGCCCTG ATCCGGCCGC CGCGACTCAG
GCGCCAAGCA ATGCCGACAA GTCTCCGGCC CAGACCTCGA GCCTGCCGCC GCCAGCCGCA
GCAGCCATGC CACAGTCCGC GCCCACGCCG ACTCGCGTGC CAGCGGGCAA TCATCAGACC
GTGCCCAAAA GCGCGCCCGA GGCTGCGCCG CAGCCAAGTG CTCCCGCCAA CGGGCAGGAT
GCCGCGATCA GTCCGACGCA GCCGTTTACG CCGCCGTTGC CGGACGCCGA TCCGCGTCGC
GCTACACCAC CGAAGCCTCG CGTCCAGCCG CAACGACCGT CGCAACCTCA GCCGCAAACG
CCACTTCAGC CACAAGCATC GACCGCCGCG TCTTCGACAT TGCGCGAAAA GCTCGCGCCA
CTGCCGCCGC CTTTGGAGAT CAAACCTGCA CCAGGAGACA CGCGCCCGTC ACGGCCACGT
CCGCCCTTGG TGTTGTCGCC CCCGAATGCG AGGGCGACCG ACTGA
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| Protein sequence | MQTTLLGLAI ALILALLAAL VGPYLIDWNQ FRTPFEAEAT RLLGAQVRVA GALDARLLPT
PSLRLQRVTV GGANDAGRFA AAKLDVEFSL GSLMRGELRA DELSINGLSL DLGLDPQGRL
DWPAVGFSNL AALTVDRLNL TGRIALHDAA SRSNLELSDI AFSGELRAQA AALRGDGNFL
LGGQRYPFRL STSRAADGDA IRLRAGINQG AGGIAADLDG LVRFGQSRPL FDGTASLAAL
AAATGETPRT PWRLAAKVEA DPALAKLDQV EVSWGADDRA LKLTGSGEAR FGAAPRLDAK
LSARQLDADR LLAKPGDVAQ PLPWLVRLRD LAESLPLPSL LARVSLDADQ IMIGNRPVTD
LVAELRGDSQ TWQLERLELR APGGTRLALR GGAGAADAAI TGTLDLSATD PDLLAAWLQG
RAPTAGSLSK ALRIAGGVRA GSDALVLDPL TVQSGGDTLR GRFAYRARRD DQGTQIDAEL
KGDSADLDAA LQWARTLAGS DGGWPEQASL TLDLGKLSVG DQVWQPAALR LAYDPHRIAL
DRLKLGTAGG LLLEGDGALD RDNATGRLAL STRAPSLGPI AAAIDPIAPA IAARLKALPT
DPGEVRAKLA LAVEKAGAVR DHVEASGALD LAGPQLSGRL TAKASPPAAD LRKLDVEALT
RRALQLDGEL SAPRGEALLS LLGLDRVIAA GDGAATLHAS GSGTWRGKLQ GKAKLTAARL
DAEASGEVEP FAAEPKASLS LNARKLDLAP LFDLPPSVAN EAPLSLSTQL AVAGSKWTFK
DIDAGIAGSR LRGRLALTRG ETAELDGEAG IDTLPLGPAL QLALGAAGRP ADEPLGQGWL
RGWRGKIAFQ AVRAELPGGS ELQPLRGVVR SDGRSLTLDS SGKLGGGDAK AVLTAKLVEA
GVALDAQLTL KDADAAALRD GTLALPPGRL SLQGTLASSG RSASALAGAL SGGGTVTLSQ
AAISGLDPSA FAVAIRAADQ GQPIDADHLA KLIEPALKAG PLKVDSAQFP ISVGDGRLKL
APTTLQAKDA RAVVSGGYDV AAGQADVRVT LISTEPAQEL PPEIRVFAAG PPDRMEWSVD
LSGLSSWLSI RRIDRETRKL QMLEQGGKPP VGPDPAAATQ APSNADKSPA QTSSLPPPAA
AAMPQSAPTP TRVPAGNHQT VPKSAPEAAP QPSAPANGQD AAISPTQPFT PPLPDADPRR
ATPPKPRVQP QRPSQPQPQT PLQPQASTAA SSTLREKLAP LPPPLEIKPA PGDTRPSRPR
PPLVLSPPNA RATD
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