Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4014 |
Symbol | fumC |
ID | 6411697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4300530 |
End bp | 4301957 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642713896 |
Product | fumarate hydratase |
Protein accession | YP_001992985 |
Protein GI | 192292380 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCGCA CGCCCCGCTC TCCCCGCCCC GCGCGTTCTG CCGCCACGCG AAGCGAGACC GATAGTTTCG GTCCGATCGA TGTCGCCGCC GACCGTTACT GGGGCGCGCA GACCGAGCGT TCGCGGCAGA ACTTCCGCAT CGGCACCGAG CGGATGCCGA TCGGCATCAT CCGGGCGCTG GCAATCGTGA AGCTGGCCGC GGCCGAGACC AACAAGGAGC TCGGCCTGCT CGACAACCGC CGCGCCGGCG CCATCGCCCG CGCCGCCCGC GAAGTGATCG ACGGCACCCA TGACGATCAC TTCCCGCTGG TGGTGTGGCA GACCGGCTCC GGCACCCAGA CCAACATGAA CCTCAACGAG GTAATTGCTA ATCGCGCCAA CGAACTGCTC GGCGGCGAGC GGGGATCGAA GAAGCCGGTA CATCCCAACG ATCACGTCAA CATGAGCCAG TCGTCGAACG ACTCGTTCCC GACCGCGATG CATATCGCCG CCGCGCAGGC GATTACGGCC GACCTGATCC CGGCGCTGAC GCTGCTGCAC GATGCGCTAC GCAAGAAGGA GAAGGCGTTC GCCAAGATCG TCAAGATCGG CCGGACTCAC ACCCAGGACG CCACCCCGCT GACGCTCGGC CAGGAATTTT CCGGCTACGC GGCGCAGCTC GCCAGCGGCA TCGCGCGGAT CAAATCGGCG CTTAAGGAGC TGTATCCGCT GGCGCAGGGC GGCACCGCGG TCGGCACCGG ACTGAACACG CATCCGAAAT TCGCCAAGGC GTTCGCCAAG CGTACCGCGG CGATTACCAA GCTGCCGTTC GTCACCGCGC CGAACAAATT CGAAGCGCTC GCCGCCAACG ACGCCTACGT GTTCGTGCAC GGCGCACTGA ACGCCGCCGC CACCGCGCTG TTCAAGATCG CCAACGACAT CCGCCTGCTC GGCTCCGGCC CGCGCTCCGG GCTTGGCGAA CTGATCCTTC CCGAGAACGA GCCCGGCTCG TCGATCATGC CCGGGAAGGT CAACCCGACC CAGTGCGAGG CGATGACCAT GGTGTGCTGC CAGGTGTTCG GCAATCAGAC CACCCTCACC GTCGCCGGCA GCCAGGGTCA CTTCGAACTC AACGTCTACA AGCCGGTGAT GGCGCAGGCG ATGCTGCAGT CGATCGGGCT GCTGGCGGAT GCGGCACGTT CGTTCACCAC CAACTGCGTC GATGGCATCC GCGCCGACGA GCAGCGGATC GGCGAACTGA TGCAGCGCTC GCTGATGCTG GTGACCGCGC TGGCGCCGAG CATCGGCTAC GACAACGCAG CCAAGATCGC CAAGGCGGCG CATCAGCGTG GTACGACCTT GAAGGAGGAA GCGGTGCGTT CGGGACTGAT CAGCGCCGCC GAATTCGACC GGCTGGTGCG GCCGGACAAA ATGACGCATC CGAGCTGA
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Protein sequence | MARTPRSPRP ARSAATRSET DSFGPIDVAA DRYWGAQTER SRQNFRIGTE RMPIGIIRAL AIVKLAAAET NKELGLLDNR RAGAIARAAR EVIDGTHDDH FPLVVWQTGS GTQTNMNLNE VIANRANELL GGERGSKKPV HPNDHVNMSQ SSNDSFPTAM HIAAAQAITA DLIPALTLLH DALRKKEKAF AKIVKIGRTH TQDATPLTLG QEFSGYAAQL ASGIARIKSA LKELYPLAQG GTAVGTGLNT HPKFAKAFAK RTAAITKLPF VTAPNKFEAL AANDAYVFVH GALNAAATAL FKIANDIRLL GSGPRSGLGE LILPENEPGS SIMPGKVNPT QCEAMTMVCC QVFGNQTTLT VAGSQGHFEL NVYKPVMAQA MLQSIGLLAD AARSFTTNCV DGIRADEQRI GELMQRSLML VTALAPSIGY DNAAKIAKAA HQRGTTLKEE AVRSGLISAA EFDRLVRPDK MTHPS
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