Gene Rpal_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4013 
Symbol 
ID6411696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4299883 
End bp4300419 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content66% 
IMG OID642713895 
Productprotein of unknown function DUF1321 
Protein accessionYP_001992984 
Protein GI192292379 
COG category[S] Function unknown 
COG ID[COG3814] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATCG ACCACATCCG ATACGACGTG CTCGCGCGCG ATGCCTTGCG CGGCGTTCTG 
CGCCACGTCC TCACCGACGT CGCTCAGCAC GGCCTGCCCG GAGAGCATCA TTTCTTCATC
ACCTTCCAGT CGAAGGGCGA TGGCGTGAAG CTGTCGCCGC GGCTGCTGGC GCAGTACCCG
GAAGAAATGA CCGTGGTGCT GCAACATCAG TTCTGGGATC TCGTCGTCAC CGAAGACCGC
TTCGAAGTCG GCCTGTCGTT CGGCGGCATC CCCGAGCGGC TGGTAGTGCC GTTCGCCTCG
ATCAAGAGCT TCTTCGATCC CTCGGTGAAG TTTGGGCTGC AATTCGAAGC CGCCGATGAG
GTCGACGAGA CCGGCGAGGC CGACGACGGC ACCGAATTGG TGACCGCGGC CCCGGCGCCT
GTGGCGCTGT CGACCTCCTC CGCGACCACC GACAGCAGCG CGCCGTCCGA CGACGATGCG
CCGCGCTCCG GCGAAGGCGC CGAAGTGGTG CGGCTCGACC GCTTCCGCAA GAAGTAA
 
Protein sequence
MAIDHIRYDV LARDALRGVL RHVLTDVAQH GLPGEHHFFI TFQSKGDGVK LSPRLLAQYP 
EEMTVVLQHQ FWDLVVTEDR FEVGLSFGGI PERLVVPFAS IKSFFDPSVK FGLQFEAADE
VDETGEADDG TELVTAAPAP VALSTSSATT DSSAPSDDDA PRSGEGAEVV RLDRFRKK