Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4010 |
Symbol | |
ID | 6411692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4297459 |
End bp | 4297959 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642713892 |
Product | protein of unknown function DUF1468 |
Protein accession | YP_001992981 |
Protein GI | 192292376 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAGG CGCCGAGCGG GCTGCGGGAG CGATCCTTGT TTCCGAGCTG GATCCGCGGA CCGCAGGATT TCGTCGGCGG GCTGGCGCTG ATGGCGGTCG CGGCTTTCGC ATTGTGGGCG GCCAGGGATC TCGGCGGCAT GCAGGGCTTT CGCTTCGGTG CCGGCACGGT GCCGCGGCTG CTGGCGCTGC TGCTGCTCGG GCTCGGCGCG GTGATCGCCG CAACCGGGAT CTTCGCCCCC GGCGAGCGGC TGGCAAAATT CCATTGGCGC GGGCCGCTGT TCGTCGGCCT CGCGATCCTG TCGTTCGCGG TGACGATTCG GCCGCTCGGC CTCGTCATCG CGACGTTTTC GAGTTTCCTG ATCTCGGCGC TCGGGACGCC GGAGACGCGC TGGAGCGAGA CCATCTTGGT CGGCCTGGTG CTGACGGCAG CCTGCTGTGG GCTGTTCGTG TACGGGCTGG CGCTGCCGTT CGCGCTGTGG CCCGCCTTCC TGACCCAGTG A
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Protein sequence | MDEAPSGLRE RSLFPSWIRG PQDFVGGLAL MAVAAFALWA ARDLGGMQGF RFGAGTVPRL LALLLLGLGA VIAATGIFAP GERLAKFHWR GPLFVGLAIL SFAVTIRPLG LVIATFSSFL ISALGTPETR WSETILVGLV LTAACCGLFV YGLALPFALW PAFLTQ
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