| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4009 |
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| Symbol | |
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| ID | 6411691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4295934 |
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| End bp | 4297448 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713891 |
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| Product | protein of unknown function DUF112 transmembrane |
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| Protein accession | YP_001992980 |
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| Protein GI | 192292375 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTGT TCTCCAATCT CGCGCTCGGC TTCCAGGTCG CCGCTTCGCC GACAAACCTG
CTGCTGTGCC TCACCGGCGC GCTCGTCGGC ACCCTGATCG GCGTACTGCC GGGCATCGGC
ACCATCGCCA CCGTGGCGAT GCTGCTGCCG ATCACTTTTG GCCTGCCGCC GGTCGGTGCG
CTGATCATGC TCGCCGGCAT CTATTACGGC GCCCAATACG GCGGTTCGAC CACCTCGATC
CTGGTCAACA TTCCGGGCGA GGCGACCTCG GTGGTGACCA CGCTCGACGG CTTTCAGATG
GCCAAGCAGG GCCGCGCCGG CCCGGCGCTG GCGATCGCCG CGATCGGCTC GTTCGCCGCC
GGCTGCTTCG CCACCGTGCT GATCGCGCTG GTCGGCGAGC CCTTGACCCG GCTGGCGCTG
GAGTTCGGTC CGGCCGAGTA CTTCTCGCTG ATGGTGCTGG GTCTGGTGTT CGCCGTGGTG
CTGGCGCGCG GGTCGGTGCT GAAGGCGGTG GCGATGATCG TGCTCGGGCT GCTGCTGTCG
ACCGTCGGCT CCGACATCGA AACCGGCGTC TCGCGCATGA CCTTCGATGT CCCGGAACTG
GCGGACGGGC TCGGCTTCGC CACGGTGGCG ATGGGCGTGT TCGGTTTCGC CGAGATCATC
CGCAACCTGG ATTTCGGCGC CGCGACCGAC CGCGAGCTGG TGCAACAGAA GATCACCGGC
TTGATGCCGA CCCGGAAGGA TCTGCGCGAC GCGGCGCCGG CGATCGGCCG CGGCACCATC
CTCGGCTCCC TCCTCGGTAT CCTGCCCGGC GGCGGGGCGG TGATCGCCTC GTTCGCGGCC
TACACGCTGG AGAAGAAGAT CGCGCGCGAC CCGAAACGGT TTGGCCGCGG CGCGATCGAA
GGCGTCGCGG CGCCGGAAAG CGCCAATAAC GCCGCCGCCC AGACCTCGTT CATCCCGCTG
CTGACGCTCG GGATCCCGCC GAACGCCGTG ATGGCCCTGA TGGTCGGCGC GATGACCATT
CACAACATTG TACCGGGGCC GCAGGTGATG AAGAACCAGC CTGAACTGGT CTGGGGCATG
ATCGCCTCGA TGTGGATCGG CAACCTGATG CTGCTGGTGA TCAATTTGCC GCTTGTGGGT
ATTTGGGTAC GATTATTGCG TGTTCCGTAC CGCTTGATGT TTCCGTCGAT CGTGGTGTTC
TGCTGTATCG GGATCTACTC GGTGAACAAC GCGCCGGTGG ACGTGGTCCT GGCCGGCGCG
TTCGGGCTGA TCGGTTACTG GCTGGTGAAG CACGATTTCG AGCCGGCGCC GCTATTGCTC
GGCATGGTGC TGGGGCCGCT GATGGAGGAC AATTTGCGGC GTGCACTGCT GATTTCGCGT
GGTGATGCCT CGGTATTCAT CACCCGGCCG CTGTCGGCCT CGCTGCTGGT CATCGCTGCC
GGCCTGCTGA TCCTGTCGGT ATTACCGATG CTGCGGCGCA AGCGTGACGA AGTGTTCGTC
GAGTCCGAGG GGTAA
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| Protein sequence | MDLFSNLALG FQVAASPTNL LLCLTGALVG TLIGVLPGIG TIATVAMLLP ITFGLPPVGA
LIMLAGIYYG AQYGGSTTSI LVNIPGEATS VVTTLDGFQM AKQGRAGPAL AIAAIGSFAA
GCFATVLIAL VGEPLTRLAL EFGPAEYFSL MVLGLVFAVV LARGSVLKAV AMIVLGLLLS
TVGSDIETGV SRMTFDVPEL ADGLGFATVA MGVFGFAEII RNLDFGAATD RELVQQKITG
LMPTRKDLRD AAPAIGRGTI LGSLLGILPG GGAVIASFAA YTLEKKIARD PKRFGRGAIE
GVAAPESANN AAAQTSFIPL LTLGIPPNAV MALMVGAMTI HNIVPGPQVM KNQPELVWGM
IASMWIGNLM LLVINLPLVG IWVRLLRVPY RLMFPSIVVF CCIGIYSVNN APVDVVLAGA
FGLIGYWLVK HDFEPAPLLL GMVLGPLMED NLRRALLISR GDASVFITRP LSASLLVIAA
GLLILSVLPM LRRKRDEVFV ESEG
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