| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4005 |
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| Symbol | |
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| ID | 6411687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4292023 |
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| End bp | 4293174 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713887 |
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| Product | HflK protein |
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| Protein accession | YP_001992976 |
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| Protein GI | 192292371 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.906349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTGGA AGAATCAAGG CGGAGGCCCG TGGGGTTCGG GCCCCAAGGG TCCGTGGGGC
TCGGGGCCAC AATCGTCGGG ACCGCGGCCG CCTGATCTCG AAGACCTGCT CCGTCGTGGT
CAGGACCGGC TGCAGCAGAT CCTTCCCGGC GGCCATTTCA GCGGGCTCGG TATCGCCATC
GTGCTGCTCG GCGCGCTCGC GATCTGGGGC CTGTCGGGCT TCTTCCGCGT CCAGTCGGAA
GAACTCGGCG TGGTGCTCCG CTTCGGCAAG CACGTCCGCA CCGTGCAGCC GGGTCTGAAC
TATCACCTGC CGTATCCGAT CGAGACCGTG CTGCTGCCGA AGGCGCTGCG CGTCAACACG
ATCAGCATCG GCATGACGCT GATCAACGAT CCGGCCCGCC GCGGCGCGAC CATGCACGAC
GTGCCGGAAG AGAGCCTGAT GCTGACGGGC GACGAAAACA TCGTCGACGT CGACTTCACC
GTGCTGTGGC GGATCAAGCC CGACGGCGTC GGCAACTACC TGTTCAACAT CCAGAGCCCG
CAGGGCACCG TGAAGGCGGT GGCCGAGAGC GCGATGCGCG AAGTGATCGG TCGCTCCGAC
ATCCAGCCGA TCCTCACCGG CGCCCGCACC ACCATCGAGA ACGCCGTGCA GGAACTGATG
CAGAAGACGC TCGACAGCTA CGGCGCGGGT GTCTTGATTC AGCAGGTGCA GATGCAGAAG
GTCGACCCGC CGCAGCAGGT CATCGACGCG TTCCGCGACG TCCAGGCCGC ACGCGCCGAC
CTCGAGCGAC TGCAGAACGA AGCGCAGACC TACGCCAACC GGGTAATCCC CGACGCCAAG
GGCCGCGCCT CGCAGATCAT CCAGAACGCC GAAGGCTACA AGGGGCAGGC GATCGCCGAG
GCCAAGGGCC AGAGCGCGCG CTTCCTCGAC GTCTTTGAGG AATACAAGAA GGCGCCGGCG
GTGACCCGCG AACGCATCTA TCTCGAAACC ATGGAACGCG TGCTCGGCTC AGCCGATAAG
CTGGTTTACG ACCCGGGCGC AGGTAACGGG CAGGGCATCG TGCCGTATTT GCCGCTGAAC
GAACTGACCC GGCGCTCGTC GCCTCCCGCA ACCGTGCAGC AGAACCAGTC AGTGGGCGGA
GGCAACCGAT GA
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| Protein sequence | MPWKNQGGGP WGSGPKGPWG SGPQSSGPRP PDLEDLLRRG QDRLQQILPG GHFSGLGIAI
VLLGALAIWG LSGFFRVQSE ELGVVLRFGK HVRTVQPGLN YHLPYPIETV LLPKALRVNT
ISIGMTLIND PARRGATMHD VPEESLMLTG DENIVDVDFT VLWRIKPDGV GNYLFNIQSP
QGTVKAVAES AMREVIGRSD IQPILTGART TIENAVQELM QKTLDSYGAG VLIQQVQMQK
VDPPQQVIDA FRDVQAARAD LERLQNEAQT YANRVIPDAK GRASQIIQNA EGYKGQAIAE
AKGQSARFLD VFEEYKKAPA VTRERIYLET MERVLGSADK LVYDPGAGNG QGIVPYLPLN
ELTRRSSPPA TVQQNQSVGG GNR
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