Gene Rpal_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4001 
Symbol 
ID6411683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp4288317 
End bp4288931 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content71% 
IMG OID642713883 
Productprotein of unknown function DUF548 
Protein accessionYP_001992972 
Protein GI192292367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAA CGGCCCGGAC CGCGCCTGCC GTCGATTTCG TCGGCGGCGC GGTCGGCTAT 
CGCTTCCGCA CCCAGGCCGG ACGCAGCCAC GCGCTGCTCA AGGCCACCGG CCTGTCGCCG 
ACGCGCTCCC TGCATGTCAT CGACGCCACC GCCGGTCTCG GCCGCGATGC CTTCCTGCTC 
GCGTCGATGG GCGCGACGGT GACGCTGATC GAGCGGGTGC CGGAGGTGCA CGCACTGCTT 
GCCGACGCGC TCGAAGCTGC TCGCGCCGAG AGTGACGAGC TCGCAGCGAT TATCGGCCGG 
ATGACGCTGC TGCACGGCGA TGCCCGTGTG CTGCTGCCGA CGCTGCAGGC CGACGTCATC 
ACCATCGATC CGATGCATCC GCCGCGGACC AAGACAGCGC TGGTCAAGCA GGAGATGCGG 
CTGCTGCGCG ACCTCGTCGG CGCCGATCCG GATGTCGGCG AGCTTCTGGC CGCTGCGCTG 
TCGGCCGATT GCGGCCGCGT CGTGCTGAAA TGGCCGCTGC GCGCCGCCGC GCCGCCGGCC 
TCGCGCAAAC CCTCGCATCA GATCGCCGGC AAGACCGTGC GCTACGACGT CTACGTCCGG 
CCGCGCGCGA CCTGA
 
Protein sequence
MAETARTAPA VDFVGGAVGY RFRTQAGRSH ALLKATGLSP TRSLHVIDAT AGLGRDAFLL 
ASMGATVTLI ERVPEVHALL ADALEAARAE SDELAAIIGR MTLLHGDARV LLPTLQADVI 
TIDPMHPPRT KTALVKQEMR LLRDLVGADP DVGELLAAAL SADCGRVVLK WPLRAAAPPA 
SRKPSHQIAG KTVRYDVYVR PRAT