| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3999 |
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| Symbol | |
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| ID | 6411681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4285569 |
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| End bp | 4286762 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642713881 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001992970 |
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| Protein GI | 192292365 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAC CGACCGGGCC GCTCGCCGGC ATCCGCATTC TCGATCTCAC CAGCGTGCTG
TTCGGCCCCT ATGCGGCGCA GATCCTCGGC GACTGGGGCG CCGACGTCAT CAAGATCGAA
ACGCTCGACG GCGACATGTG GCGCTACACC GGGCTGTTTC GAAACCGCGG TATGAGCGGC
CAGTTCATGG CCGTGAACCG CAACAAGCGC AGCCTCGCGC TGGACCTGAA GCATCCCGAC
GGCAAGGCGG TGCTGCAGCG GCTGATCCCG ACCGCCGATG TGCTGCTCAC CAATGTTCGC
CCGGCCGCAA TGGCGCGGCT TGGCTTCGGC TACGAGGCCT GCGCGGGGCT CAATCCGCGG
CTGATCTACG CCGCGGCGAC CGGCTTCGGC CAGGACGGCC CGTGGGCGGC GCGGCCGGCA
TTCGACGAGA TCATCCAGGC GGCTTCGGGC CTCGCGTCCT CGATCGGCTC GGACGACGAG
CCGCAATTCG TGCCGAGCCT GGTCGGCGAC AAGATCTGCG GCCAGGCGCT CGCCGGCGCG
GTATCGGCGG CACTGTTCAG CCGCGAACGC ACCGGCAAGG GCCAACTGGT CGAAGTGCCG
ATGCTGGAGA CGATCGCCGG CTTCAACAGC ATCGAGATGC TCGGCGGCTA CGCGTTCGAT
CCGCCGATCG GCCCGTCCGG CTACAAGCGG ATGAAGGAGC GCAAGCCGGT GCGCACCAAG
GACGGCTGGA TGACGATGCT GCCGTACTCC GGCGACAACT GGTGCGCGTT CTTCGAAGCG
GTCGGCCGTC CCGAACTGAT CGACGAACTG CAGGTGCGCG ATCCGGTGGC GCGGGCCGAG
AACATCGACC GGATCTACGC CGCGATGGCC GAGATCGCGC CGGCCCGCAC CACCGCGGAA
TGGGAAGAGC TGCTGCTGCG CCTCGACGTG CCGCACACGG CGTTTGCCAA GATCAGCGAG
ATCGGCGAGC AGGAGCATCT CAAAGCGGTC GGCCTGTTCG CCGCGATCGA TCACCCGAGC
GAAGGCAGGA TCCGCCAGGC CCGCCCGGCG ACGCGCTTCT CTGAAGCCCC GCCCAACCTT
CACCGCCCAT CCCCGCGCCT CGGCGAACAT TCCCGCGAGG TGCTGCTGGA CGCCGGCTAC
CGTGCCGACG AGATCGACGC GCTGGTGCTG GCGAAGGCGG TGGGAGAGGG GTGA
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| Protein sequence | MTAPTGPLAG IRILDLTSVL FGPYAAQILG DWGADVIKIE TLDGDMWRYT GLFRNRGMSG
QFMAVNRNKR SLALDLKHPD GKAVLQRLIP TADVLLTNVR PAAMARLGFG YEACAGLNPR
LIYAAATGFG QDGPWAARPA FDEIIQAASG LASSIGSDDE PQFVPSLVGD KICGQALAGA
VSAALFSRER TGKGQLVEVP MLETIAGFNS IEMLGGYAFD PPIGPSGYKR MKERKPVRTK
DGWMTMLPYS GDNWCAFFEA VGRPELIDEL QVRDPVARAE NIDRIYAAMA EIAPARTTAE
WEELLLRLDV PHTAFAKISE IGEQEHLKAV GLFAAIDHPS EGRIRQARPA TRFSEAPPNL
HRPSPRLGEH SREVLLDAGY RADEIDALVL AKAVGEG
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