Gene Rpal_3993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3993 
Symbol 
ID6411675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4280153 
End bp4281001 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content59% 
IMG OID642713875 
Producthypothetical protein 
Protein accessionYP_001992964 
Protein GI192292359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGTTGG AAAGAAAGCC CGAACAACAA GAGTATAGCT CCGATGCCTT CATATGCGCG 
GCTGCGACAG AGACAAAGCG GTCGAAAAAT GTTTCGGCTT CGCGGTCGAA AAAAGTTCAG
CAGCGGCGCC GGCGCACGCC CTTCAAAGAC GCTCAAACAC TCCGAAAAAT AAGCACTTTT
GAGCTTCCAA CCGCGCCCCC CGCTGAGAAG CCTTTAGTTG CACACTCACA CACCCCTTGC
CACGCCACCT CTAGCCCTTC CACCACCTCA GCAAGGGTCG AGAGCGTTGC CCCAGCGAAC
GACAACAACC TCCCTGTATG GGAGCTGACC GGGGACGTCG TGAAGGTGTT CGCCGCCAGC
GTGGCGCTAC AGCTTGAAGA CGAGCGGCGC GCGGTCGGCT TCGTCTTCAA TCTGACGCTC
GAGGCTGTAG AGAGGGCCTC CAAGCATCCA GCAGGCTTTC TAGACCGTCT GAAACGCGAT
CTAGACCGGG AGGTAAAGCG GGCCGGCTTT GACCTTCCTT ACTGGTTCTG TATCGACGTC
GATCGCGACA AGCGCCTGCA CATTCACGGC GCTTTCCTCT CCCATGACAT GGAGCTTCCA
CGGCTCCGGG AGCTGTTCAG GAAGGCGTGG GGCGAGTGGA AAGGTCCGGG CAAGGATAAG
CAGCTCTGGT TAAGCCCGCT CGCCGTAGAT GACGGCTGGG GCTCCTACAG CATGCGTAAT
CAGAAGCGGG TGGCGAAGAT TATCGGCGAG CGAACCTTCA CGATCTCGCA GCCGCTGCGC
CGGGAAGCCC AATCCGCCTA CAATGAAATC CGCCGCATCA TGCGCTCAGA ACAGCGCCGG
ATCAGCTAA
 
Protein sequence
MPLERKPEQQ EYSSDAFICA AATETKRSKN VSASRSKKVQ QRRRRTPFKD AQTLRKISTF 
ELPTAPPAEK PLVAHSHTPC HATSSPSTTS ARVESVAPAN DNNLPVWELT GDVVKVFAAS
VALQLEDERR AVGFVFNLTL EAVERASKHP AGFLDRLKRD LDREVKRAGF DLPYWFCIDV
DRDKRLHIHG AFLSHDMELP RLRELFRKAW GEWKGPGKDK QLWLSPLAVD DGWGSYSMRN
QKRVAKIIGE RTFTISQPLR REAQSAYNEI RRIMRSEQRR IS