Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3993 |
Symbol | |
ID | 6411675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4280153 |
End bp | 4281001 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642713875 |
Product | hypothetical protein |
Protein accession | YP_001992964 |
Protein GI | 192292359 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGTTGG AAAGAAAGCC CGAACAACAA GAGTATAGCT CCGATGCCTT CATATGCGCG GCTGCGACAG AGACAAAGCG GTCGAAAAAT GTTTCGGCTT CGCGGTCGAA AAAAGTTCAG CAGCGGCGCC GGCGCACGCC CTTCAAAGAC GCTCAAACAC TCCGAAAAAT AAGCACTTTT GAGCTTCCAA CCGCGCCCCC CGCTGAGAAG CCTTTAGTTG CACACTCACA CACCCCTTGC CACGCCACCT CTAGCCCTTC CACCACCTCA GCAAGGGTCG AGAGCGTTGC CCCAGCGAAC GACAACAACC TCCCTGTATG GGAGCTGACC GGGGACGTCG TGAAGGTGTT CGCCGCCAGC GTGGCGCTAC AGCTTGAAGA CGAGCGGCGC GCGGTCGGCT TCGTCTTCAA TCTGACGCTC GAGGCTGTAG AGAGGGCCTC CAAGCATCCA GCAGGCTTTC TAGACCGTCT GAAACGCGAT CTAGACCGGG AGGTAAAGCG GGCCGGCTTT GACCTTCCTT ACTGGTTCTG TATCGACGTC GATCGCGACA AGCGCCTGCA CATTCACGGC GCTTTCCTCT CCCATGACAT GGAGCTTCCA CGGCTCCGGG AGCTGTTCAG GAAGGCGTGG GGCGAGTGGA AAGGTCCGGG CAAGGATAAG CAGCTCTGGT TAAGCCCGCT CGCCGTAGAT GACGGCTGGG GCTCCTACAG CATGCGTAAT CAGAAGCGGG TGGCGAAGAT TATCGGCGAG CGAACCTTCA CGATCTCGCA GCCGCTGCGC CGGGAAGCCC AATCCGCCTA CAATGAAATC CGCCGCATCA TGCGCTCAGA ACAGCGCCGG ATCAGCTAA
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Protein sequence | MPLERKPEQQ EYSSDAFICA AATETKRSKN VSASRSKKVQ QRRRRTPFKD AQTLRKISTF ELPTAPPAEK PLVAHSHTPC HATSSPSTTS ARVESVAPAN DNNLPVWELT GDVVKVFAAS VALQLEDERR AVGFVFNLTL EAVERASKHP AGFLDRLKRD LDREVKRAGF DLPYWFCIDV DRDKRLHIHG AFLSHDMELP RLRELFRKAW GEWKGPGKDK QLWLSPLAVD DGWGSYSMRN QKRVAKIIGE RTFTISQPLR REAQSAYNEI RRIMRSEQRR IS
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