Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3990 |
Symbol | |
ID | 6411672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4277108 |
End bp | 4277503 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642713872 |
Product | phage protein, HK97 gp10 family |
Protein accession | YP_001992961 |
Protein GI | 192292356 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01725] phage protein, HK97 gp10 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGACG ATCTCACTCG ATACCTGAAC TCGCTCCCCG ACAAGGTTCG CCAGCAAGTC TCGGATGCCG TTCGCACGGA AGCCGAACGC CTCTCCGCCG CACAGCGCGC CGCGCTGAAA GCTCAAGAGC AAGCACCCGA CGAAACCGGT GACTTGGAAG CGAGCTGCAC CACGACCCCC GGTCGCGACG AATTCGAAGT CATCGTGCAA GCCGGCGGCG ACGCCACGAC GAAGGAAGTG CGCGAAGGAA GCGGCGAGCC ATACGACTAC GCGGAAGCGT TCGAATACGG CACCTCGCGC CAGCCGGCGC GCCCTTTCTT TTTCAACACC TACGACGCCA TGCGCGCCGA AATCGAAACC AACATCGGAA ACGCAATCAG CGAGGCATTG AAATGA
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Protein sequence | MADDLTRYLN SLPDKVRQQV SDAVRTEAER LSAAQRAALK AQEQAPDETG DLEASCTTTP GRDEFEVIVQ AGGDATTKEV REGSGEPYDY AEAFEYGTSR QPARPFFFNT YDAMRAEIET NIGNAISEAL K
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