| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3971 |
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| Symbol | |
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| ID | 6411652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4262669 |
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| End bp | 4263892 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713852 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001992942 |
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| Protein GI | 192292337 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAC CCGGCGCCTA TCGCAGGGCC TTCGTCGTCG CGTGCCTGCT GCTCGCAGCG
GGCGGTTCTT ATTGGGGTTG GCAACGCATC CAGGCCGGAC GCTCCGCCGC GCCGGGCGGC
ACGCCGCAGG CACAATCGGG CACCTCCGCG CCGAAGGCCG GCGCAGGCCG CAACGCAGCG
GTTCCCGTGA CGGTGGCGAC GGCGCAAAAA GCCGACTTCC CGGTGTATCT GAGCGGGCTC
GGCACTGTGC AGGGCTTCAA CACCGTTCTG GTGCGCAGCC GGGTCGACGG GCAGCTCGAC
AAGATCGCCT TCACCGAAGG CCAGATCGTC CAGGCCGGGG ACCTGCTGGC GCAGATCGAT
CCGCGCCCGT TCCAGGCCGC GCTCGACCAG GCCAAGGCCA AGAAGCAGCA GGACGAGGCC
AATTTCGCCA ACGCCCAGCT CGACCTCAGC CGCTCAGTCC GGCTCGGTGA ATTCGCCACC
AAGCAGCAGA CCGACACCCA GCGATCGAAC GTGCAGCAGC TCACCGCGCA GCTCGCCGCC
GACGACGCCG CGATCGCCAA CGCTCAGACC CAGCTCGATT ATGCGACGAT CCGTGCGCCG
ATCTCCGGCG TCACCGGGCT GCGCCAGGTC GACAAGGGCA ACATCGTCAA CGCCGCCAGC
CAGACCGGCA TCGTCACCAT CGCGCAGATC GAACCGATCG CGGTGATCTT CACCGCGCCG
GAAGAGCGCG TGTTCGACAT CAACCGCGCC CTCGCCGCAC GTCCGCTGCA GGTGATCGCG
CTGTCCACCG ACGCCAAGAC CACCTTCGCC GAAGACGGCA CGCTGGCGGT GGTCAACAAT
CAGGTCGACA GTAACAGCGG CACGGTGCGG CTCAAGGCCG TGTTCGCCAA CAAGAACCAC
GCGCTGTGGC CCGGCCTGTC GGTGCAGACC CGGCTGCTGG TGAAGACTTT GAAGGACGTC
GTGGTGGTTC CGAACGATGC CGTCCAGCAC GGCACCGATG GGCTCTATGC CTACGCGGTC
GACGCGGACA ACAAGGCCGA GCTGCGCAAG CTGGTGGTGG GCCCCGCCAA CGACCAGAAC
ACCGTGATCG AGCGCGGCCT GGAGCCCGGC GATCGGGTCG TGGTCGGTGG CCAGTACAAG
GTTAAGCCGG GCACGCCACT GGCGTTCAAG GTTGCCGACA ACGAACCGGC GGCGCCGGCC
CAGCCCAAGC CGGCCGGGAA ATAG
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| Protein sequence | MSKPGAYRRA FVVACLLLAA GGSYWGWQRI QAGRSAAPGG TPQAQSGTSA PKAGAGRNAA
VPVTVATAQK ADFPVYLSGL GTVQGFNTVL VRSRVDGQLD KIAFTEGQIV QAGDLLAQID
PRPFQAALDQ AKAKKQQDEA NFANAQLDLS RSVRLGEFAT KQQTDTQRSN VQQLTAQLAA
DDAAIANAQT QLDYATIRAP ISGVTGLRQV DKGNIVNAAS QTGIVTIAQI EPIAVIFTAP
EERVFDINRA LAARPLQVIA LSTDAKTTFA EDGTLAVVNN QVDSNSGTVR LKAVFANKNH
ALWPGLSVQT RLLVKTLKDV VVVPNDAVQH GTDGLYAYAV DADNKAELRK LVVGPANDQN
TVIERGLEPG DRVVVGGQYK VKPGTPLAFK VADNEPAAPA QPKPAGK
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