| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3961 |
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| Symbol | |
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| ID | 6411642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4251267 |
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| End bp | 4252331 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642713842 |
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| Product | ABC transporter related |
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| Protein accession | YP_001992932 |
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| Protein GI | 192292327 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.565548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCGG TGCAGATTCA CGACGTGCGT AAGTCTTTCG GCGGCTTCGA AGTATTGCAC
GGCGTGACTG TTCCCATCGA GGATGGTGAG TTCGTCGTTC TGGTCGGCCC GTCCGGCTGC
GGCAAATCCA CTTTGCTGCG GATGCTCGCA GGGCTGGAGA AGATCACTGC CGGAACGATC
TCGATCGGTG AGCGCGTCGT CAACGACGTG CAGCCGAAGG AGCGGGACAT CGCGATGGTG
TTCCAGAACT ACGCGCTGTA TCCGCACATG ACCGTCGCCC AGAACATGGG CTTCTCGCTG
AAGCTGCGCG GCGCCGACCA GAAGGCCATC GACAGCAAAG TGCAGCGGGC GGCCGACATC
CTCGATCTCG GCAAGCTGCT CGACCGCTAT CCGCGCCAGC TCTCCGGCGG CCAGCGCCAG
CGCGTTGCGA TGGGGCGGGC GATCGTGCGC GATCCGCAGG TGTTCCTGTT CGACGAGCCG
CTGTCGAACC TCGACGCCAA GCTGCGGGTG GCGATGCGCA CAGAGATCAA GGAGCTGCAT
CAGCGGCTGA AGACCACCAC GGTTTACGTC ACCCACGATC AGATCGAGGC GATGACGATG
GCCGACAAGA TTGTGGTGAT GCAGGACGGT ATCGTCGAGC AGATCGGCGC GCCGCTCGAC
CTGTACGACC GGCCCGACAA TAAGTTCGTG GCCGGCTTCA TCGGTTCGCC GGCGATGAAC
TTCCTCGACG GCACGCTGAA AGTGAATGGC GGCCAGCCAT ATGTCGAGAC CGCCAGCGGC
GCCAAGCTGC CGATCGCCGC GGCGCCTGCG AACGGCAATG GCCGCCCGGT GTCCTACGGC
ATTCGTCCCG AGCATCTCGA CTTTGCAGAT AGTGGCATCC CGGCCGAGGT CGCGGTGGTC
GAACCGACCG GCTCGGAAAC CCAGATCGTG GCCCGGGTCG GAAATCAGGA AGTGATCGCG
GTTTTTCGCG AGCGGCATCC GGTCGGGCCC GGCGATCTGA TCCATCTGCA GCCGCGCGCC
GACGTCGCGC ATCTGTTCGA CAAGGAGAGC GGCCGGCGGA TCTAG
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| Protein sequence | MASVQIHDVR KSFGGFEVLH GVTVPIEDGE FVVLVGPSGC GKSTLLRMLA GLEKITAGTI
SIGERVVNDV QPKERDIAMV FQNYALYPHM TVAQNMGFSL KLRGADQKAI DSKVQRAADI
LDLGKLLDRY PRQLSGGQRQ RVAMGRAIVR DPQVFLFDEP LSNLDAKLRV AMRTEIKELH
QRLKTTTVYV THDQIEAMTM ADKIVVMQDG IVEQIGAPLD LYDRPDNKFV AGFIGSPAMN
FLDGTLKVNG GQPYVETASG AKLPIAAAPA NGNGRPVSYG IRPEHLDFAD SGIPAEVAVV
EPTGSETQIV ARVGNQEVIA VFRERHPVGP GDLIHLQPRA DVAHLFDKES GRRI
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