| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3957 |
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| Symbol | |
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| ID | 6411638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4246605 |
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| End bp | 4247591 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713838 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001992928 |
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| Protein GI | 192292323 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.423023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCACATTC TGATACTCGG CGCCGCCGGC ATGGTCGGGC GCAAGCTCAC CGACCGGCTG
CTGGCGGACG GGCGGCTCGG CAGCCGCGAG ATCACCCGGA TGACGCTGCA GGACGTGGTG
GCGCCGGTAC GGCCGCCGCA TGCCTCGATC GCGATCCAGG TGGTAACCAG CGATCTCGCC
GAGCCCGGTC AGGCGGCGGC GCTGGTGGCG CATCGGCCGG AGGTGATCTT CCATCTGGCG
GCAATCGTCT CGGGCGAAGC TGAGGCCGAT TTCGACAAGG GCTACCGGAT CAATCTCGAC
GGCACCAAGC ATCTGATCGA CGCGATCCGT GCCGAGGGCG ACGACTATCA TCCGCGGCTG
GTGTTCACCT CGTCGATCGC GGTGTTCGGC GCGCCGTTCC CGCAAGAGAT CGGCGATGAA
TTCCTGTCGG CGCCGCTGAC CAGCTACGGC ACCCAGAAGG CGATCTGCGA GCTTCTGATC
GCCGACTACA CCCGCAAGGG CTTCTTCGAC GGCGTCGGCA TCCGCCTGCC GACGATCTGC
GTGCGCCCCG GCAAGCCGAA CAAGGCGGCA TCCGGTTTCT TCTCCAACAT CATCCGCGAG
CCGCTGAACG GCGAAGAGGC GGTGCTGCCG GTGTCCGACG AGGTGATGCA TTGGCACGCC
TCGCCGCGCT CGGCGGTCGG CTTCCTGATC CACGCCGCCA CCATCGACAC CGCCGCGACG
GGGCCGCGCC GCAGCCTGTC GATGCCCGGG CTGGCCGCCA CCGTCGGCGA ACAGATCGCC
GCCTTGGAGC GCGTGGCCGG CAAGGCTGTG GCAGCGCGGA TCAAGCGCGA GCCCGATCCG
ACCATCATCG GCATCGTCGC CGGCTGGCCG CGCAACTTCT CGACCGACCG GGCGCTGAAG
CTCGGTTTCA CCACCGCGGA AAAGACCTTC GACGACATCA TCCGGATCCA CATCGAGGAC
GAATTGGGCG GCAGGTTCGT GGCCTGA
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| Protein sequence | MHILILGAAG MVGRKLTDRL LADGRLGSRE ITRMTLQDVV APVRPPHASI AIQVVTSDLA
EPGQAAALVA HRPEVIFHLA AIVSGEAEAD FDKGYRINLD GTKHLIDAIR AEGDDYHPRL
VFTSSIAVFG APFPQEIGDE FLSAPLTSYG TQKAICELLI ADYTRKGFFD GVGIRLPTIC
VRPGKPNKAA SGFFSNIIRE PLNGEEAVLP VSDEVMHWHA SPRSAVGFLI HAATIDTAAT
GPRRSLSMPG LAATVGEQIA ALERVAGKAV AARIKREPDP TIIGIVAGWP RNFSTDRALK
LGFTTAEKTF DDIIRIHIED ELGGRFVA
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