| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3953 |
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| Symbol | |
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| ID | 6411634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4241119 |
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| End bp | 4242321 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713834 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001992924 |
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| Protein GI | 192292319 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.15496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCCAC TGGCGGGCAC GACAATCGTC GACATGACGT CGGTGCTGAT GGGCCCTTAC
GCCACCCAGA TGCTCGGCGA CTACGGCGCG GACGTCATCA AGATCGAATC CCCGGACGGC
GATGTCACGA GGCAGATCGG CCCGGCGCGG CATCCCGGCA TGGGGCCGGT GTTTCTCAAT
GCCAACCGCA ACAAGCGCAG CATCTGCCTC GACCTCAAGC ATGACGCCGG CCGCGCCGCC
GCGCTGCGGC TGATCGCGCG CGCTGATGTG CTGGTCTATA ACGTTCGCCC GCAGGCGATG
GCGCGGCTGC GGCTCGGCTA TGACGATGTC GCGCCGCTCA ATCCGCGGCT GATCTATGCC
GGCGTGTTCG GCTTCGGCCA GGACGGGCCG TATGCGGCGA AGCCTGCGTA TGATGACCTA
ATCCAGGGCG CCACCGCGTT GCCGGCGCTG AATGCGCGGG TCGGTGACGG CACGCCGCGC
TACGTGCCGA ATGCGCTGGT CGACCGTATC GTCGGGCTCA CCGCGGTCGG CGCGATCTGC
GCCTCGCTGG TGAATCGGGA TCGCACCGGC AAGGGCCAGC GGCTCGACAT CCCGATGTTC
GAAACCATGG CGAGCTTCGT GATGGGCGAT CACATGGGCG GCCTCACCTA TGAGCCGGCG
CTTGATCGCG GTGGTTACGC GCGGCATCTG TCGCCGGACC GCCGGCCTTA TCAGACTGCG
GACGGCTACA TCTGCGCGAT GGTCTATAAC GACAAGCAGT GGATCAGCTT CCTCACCGCG
GTCGGCCGCG ACGATCTGCT CGCCGACGAT CGCTACACCA GCTTCGCCCG GCGCGCGGTG
AACATCGACG TGGTCTATGC CGAGCTGGCG CGGATCTTCC TGACGAGGAC CACGGAGGAG
TGGGTGACGC TGCTCGACGA AGCCGACGTG CCGGCGATGC GGATGCACGA TCTCGAAAGC
ATCCTGCATG ACCCGCATCT GGTCGCGACG GATTTCTTCC CCGTCGTCCA GCATCCGAGC
GAAGGCGCGA TCCGCGACAT GAAGGTCTCG GCGACCTGGT CGGACACCAA GGTCGAGCGC
CAGCGTTTTG CGCCGCGGCT CGGCGAGCAC GGTGCCGAGG TGCTGAGCGA GGCGGGTTAT
GGCGACGGTG AGATCGCGGC GCTGGCGGAA TGTGGGGCCG TCAGGTTGCC GGAAGCGAGC
TGA
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| Protein sequence | MGPLAGTTIV DMTSVLMGPY ATQMLGDYGA DVIKIESPDG DVTRQIGPAR HPGMGPVFLN
ANRNKRSICL DLKHDAGRAA ALRLIARADV LVYNVRPQAM ARLRLGYDDV APLNPRLIYA
GVFGFGQDGP YAAKPAYDDL IQGATALPAL NARVGDGTPR YVPNALVDRI VGLTAVGAIC
ASLVNRDRTG KGQRLDIPMF ETMASFVMGD HMGGLTYEPA LDRGGYARHL SPDRRPYQTA
DGYICAMVYN DKQWISFLTA VGRDDLLADD RYTSFARRAV NIDVVYAELA RIFLTRTTEE
WVTLLDEADV PAMRMHDLES ILHDPHLVAT DFFPVVQHPS EGAIRDMKVS ATWSDTKVER
QRFAPRLGEH GAEVLSEAGY GDGEIAALAE CGAVRLPEAS
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