| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3952 |
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| Symbol | |
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| ID | 6411633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4239801 |
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| End bp | 4240937 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713833 |
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| Product | putative thiolase |
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| Protein accession | YP_001992923 |
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| Protein GI | 192292318 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.130005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTACA TCACCGGCGT GGGTCTCACG CCGTTCGGCA AGATCGATGG TTCGACCACG
CTCGGCCTGA TGCGGGAGGC GGCGGAGGCG GCGATCGCGG ATGCGGGGCT GAAGCGCGGC
GACATCGACG GGCTGCTGTG CGGCTATTCG ACCACGATGC CGCACATCAT GCTGGCGACG
GTGTTCGCCG AGCATTTCGG CATCCGGCCG AGCTATTGCC ACGCGGTGCA GGTCGGCGGC
GCCACCGGCA TGGCGATGGC GATGCTGGCG CATCAGCTGG TCGAGAGCGG GGCGGCCAAG
AACATCCTGG TGGTGGGCGG CGAGAACCGG CTGACCGGGC AGAGCCGCGA CGCCTCGGTG
CAGGCCCTGG CGCAGGTTGG TCACCCGATC TACGAGGTGC CGCTGGGGCC GACCATCCCG
GCCTATTACG GCCTGGTGGC GTCGCGCTAC ATGCACGACC ACGGCGTCAC CGAGGAAGAC
CTCGCCGCGT TCGCGGTGCT GATGCGCAGC CACGCGATCA CCCATCCCGG CGCGCAGTTT
CACGAGCCGA TCAGCGTCGC CGAGGTGATG GCGTCGAAGC CGATTGCCTC GCCTCTGAAG
CTGCTCGATT GCTGCCCGGT GTCCGATGGC GGCGCCGCGC TGGTGATCAG CCGCGAGCCG
ACTACCGCGC ATCAGATCAA GGTGCGCGGC TGCGGCCAGG CTCATACCCA TCAGCACGTC
ACAGCAATGC CGGCGGATGG GCCGTCTGGA GCGGAGCTGT CGATCGCGCG CGCCTGGGCC
ACAAGCGGTG TCGGAATTGC CGACGTGAAA TATGCTGCCG TGTACGACAG CTTCACCATC
ACGCTGCTGA TGCTGCTCGA AGACCTCGGG CTCGCAGGCC GAGGCGAGGC GGCGGCGCGG
GCGCGGGACG GCCACTTCTC GCGAACCGGC GCGATGCCGC TGAACACCCA TGGCGGCCTA
TTGTCCTACG GCCATTGCGG CGTCGGCGGC GCGATGGCGC ATCTGGTCGA GACGCATCTG
CAGATGACCG GCCGGGCCGG CGACCGTCAG GTGCGTGATG CGTCGCTGGC GCTGCTGCAC
GGCGATGGCG GCGTGTTGTC GTCGCATGTC AGCATGATCC TGGAGCGGGT GCGATGA
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| Protein sequence | MSYITGVGLT PFGKIDGSTT LGLMREAAEA AIADAGLKRG DIDGLLCGYS TTMPHIMLAT
VFAEHFGIRP SYCHAVQVGG ATGMAMAMLA HQLVESGAAK NILVVGGENR LTGQSRDASV
QALAQVGHPI YEVPLGPTIP AYYGLVASRY MHDHGVTEED LAAFAVLMRS HAITHPGAQF
HEPISVAEVM ASKPIASPLK LLDCCPVSDG GAALVISREP TTAHQIKVRG CGQAHTHQHV
TAMPADGPSG AELSIARAWA TSGVGIADVK YAAVYDSFTI TLLMLLEDLG LAGRGEAAAR
ARDGHFSRTG AMPLNTHGGL LSYGHCGVGG AMAHLVETHL QMTGRAGDRQ VRDASLALLH
GDGGVLSSHV SMILERVR
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