Gene Rpal_3933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3933 
Symbol 
ID6411614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp4220529 
End bp4221239 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content68% 
IMG OID642713814 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001992904 
Protein GI192292299 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.787186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAC TCGCCGCTGC CCCAGACCCG GAGATCGCCA CCAGCGACAC GCTCAGCGAG 
CGCGCGGCGA ACCTGCTCGA GCGCGATATC GTCTCGGGCG AGCTGCCGCC GGGATCGAAG 
CTCGGCATCG TCGAGCTGGC GCGGCGTTAC GAGATCGGCG CTACGCCGCT GCGCGAGGGG 
CTGTCGCGGC TGACGTCGCG CGGGTTGATC GTCGCGATCG GGCAGCGCGG CTTCCGCGTC 
GCCGAAGTCA GCCGTGACGA TCTGCTCGAC ATCACGCGGA TGCGGACGGT GATCGAACGC 
GAGGCGCTAC GGCTCGCGAT CGACAACGGC GGCGACGCCT GGGAGGCCGG GATCGTCGCG 
GCGCTGCACC AGATGCAGCG CTACGTGGAG CGCAACGCCA ACGATTTCCG CGAAGGCACG 
CCGGAGTTCG ATCGGCTGCA CAAGGCGTTT CACACCAGCC TGCTCGCAGC CTGCGGCTCT 
CCTCGCCTGC TGGCCGCGCA TTCGGACCTG TACGATCAGG CCTATCGCTA TCGGCGGGTG 
ATGATGCGCA GCATCGAAAG CGGCCGGTAC TTCATCGCCG CGCATCGCGA ATTGGCCGAC 
CTCGTGCTCG CACGCGACGC CGAGGCCGCA CAGACCAAGC TCGACCAGCA TCTGCGCGCG 
ACGCTGACTA CCGTCTATCC GCCGGGCAAG AGCCAGCCGC CATCCCGCTG A
 
Protein sequence
MTKLAAAPDP EIATSDTLSE RAANLLERDI VSGELPPGSK LGIVELARRY EIGATPLREG 
LSRLTSRGLI VAIGQRGFRV AEVSRDDLLD ITRMRTVIER EALRLAIDNG GDAWEAGIVA 
ALHQMQRYVE RNANDFREGT PEFDRLHKAF HTSLLAACGS PRLLAAHSDL YDQAYRYRRV 
MMRSIESGRY FIAAHRELAD LVLARDAEAA QTKLDQHLRA TLTTVYPPGK SQPPSR