Gene Rpal_3932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3932 
Symbol 
ID6411613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp4219412 
End bp4220401 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content64% 
IMG OID642713813 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001992903 
Protein GI192292298 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.707653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCTTG CAACCTTTCG GGTCGATGGA AGCGAACGGA TCGGCATCGT TCATGACGGC 
GATCAGCGCT TGTTCGATCT CGCCGCGGCC GCCGATCGCG TAGGCGCCAG CAATCCCGCT 
TTCGCATCCA TGCTCGGTCT GATCGATGCC GGCGACGCGG CGCTCGATGC GGCGCGGTCG 
TTGTTCGACA AGCACGGCAA GGACGAGAGC CTGTCGCGCG ACGTTGCCTC GGCCGAGATT 
CTCGCGCCGG TCCCGGAGCC GCGCCAGATG CGCGACGGCA TGTCGTTTCC GCTGCACATC 
CTGCAGGCGC CGCGCGGCCA GCGAAAGCTC GCAGCGCGCG CCAAGGGCGA CATGGACGAG 
CTCGCCCGGA TCGATGCCGA GCCGCTCGGC GAATTGCCGG AGGTCTATCG CAAGCAGCCG 
ATCTTCTACA TCACCAACCG CTTCTCGGTG CGCGGCACCA ATACCGTGGT GAAATGGCCG 
CGCTATTCGG CGGTGATGGA CTACGAACTC GAGTTTGGCA TCATCACTAA GCGCAAGGGA 
GCGAACATTT CGGCCGCGCA GGCCAAGGAC CACATCTTCG GCTACACGAT CTTCAACGAT 
TTCTCGGCGC GGGATGCGCA GCGGATCGAG ATGGAGGGGC GGCTCGGGCC GGCCAAGGGC 
AAGAGCTTCG ACGGCGGCAA CGTCATCGGC CCCTGGATCG TGACGCCGGA CGAGATCGGC 
GATCCCTATC GGCTGAAGAT GGAGGCCCGC GTCAACGGCG AGGTGCGCTC GCGCGGCGTG 
ACCGAGGGCA TGCTGTTCTC GTTCGAAGAG ATCATCGCGC ATGTCAGCCG CGACGAAACG 
CTGATGCCGG GCGAGTTCAT CGGCTCGGGC ACCGTCGGCA ACGGTTGCGG TCTGGAGCTC 
GGCTGGTTCC TGGAGCACGG CGACGTCATC GAACTCGAAG TCGAGAAAAT CGGTGTCCTG 
AAAAACAAGG TCGAGCGGCA GCAAGCCTGA
 
Protein sequence
MKLATFRVDG SERIGIVHDG DQRLFDLAAA ADRVGASNPA FASMLGLIDA GDAALDAARS 
LFDKHGKDES LSRDVASAEI LAPVPEPRQM RDGMSFPLHI LQAPRGQRKL AARAKGDMDE 
LARIDAEPLG ELPEVYRKQP IFYITNRFSV RGTNTVVKWP RYSAVMDYEL EFGIITKRKG 
ANISAAQAKD HIFGYTIFND FSARDAQRIE MEGRLGPAKG KSFDGGNVIG PWIVTPDEIG 
DPYRLKMEAR VNGEVRSRGV TEGMLFSFEE IIAHVSRDET LMPGEFIGSG TVGNGCGLEL 
GWFLEHGDVI ELEVEKIGVL KNKVERQQA