| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3928 |
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| Symbol | |
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| ID | 6411609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4214967 |
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| End bp | 4216154 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713810 |
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| Product | amidohydrolase |
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| Protein accession | YP_001992900 |
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| Protein GI | 192292295 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.530582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACCA TCGACCGTAT CGACGCCTTC GCCGACGAAA TGACCGCGAT CCGCCGCGAC
CTCCACGCCC ATCCCGAGAT CGGGTTCGAA GAGGTGCGGA CCTCCAGCAT CGTCGCCGAG
AAGCTCGGCC AATGGGGCAT CGAGGTGCAT CGCGGCATCG GCGGCACCGG CGTCGTCGGC
GTGCTCAAGG GCAAAGGCGA CGGCGGCCGC CGCATCGGCC TGCGCGCCGA CATGGACGCG
CTGCCGATGG ACGAAGCCAC CAACCTGCCG TGGCGCTCGA CCATCCCCGG CCGCTTCCAC
GGCTGCGGCC ACGACGCCCA CACCACCATG CTGCTCGGCA CCGCGCGCTA TCTCGCCGAG
ACCCGCAATT TCGACGGCAC GGTGCACTTC ATCTTCCAGC CCGCCGAGGA AGGCCTCGGC
GGCGCGCGCG CGATGCTAAA GGACGGATTG TTCGAGAAAT TTCCGTGCGA CGAAGTGTAC
GGCCTGCACA ACGCGCCGGA CCTCGGCCAC GGCGAGATCG CGATCCGGCC CGGCCCGGCG
ATGGCCGGCG CCGATTTCTT CGACATCACC ATCTCGGGCT ACGGCGCCCA CGGCGCGATG
CCGGAGCGCT CCAAGGACCC GGTGGTGATC GCGATGACGC TCGGCCAGGC GCTGCAGACC
ATCGTCAGCC GCAACGTCGA TCCGCTGCAG TCGGCGGTGC TGTCGATCAC TCAAATCCAC
TCCGGCTCAG CCTATAACGT GATCCCCGGC GAAGCGCGGC TCGCCGGCAC GGTGCGCGCG
TTCTCCGACG AGATCCGCAA CCTGATCCGC ACCCGGATGC GCGCGGTCGC GGCCGGCATT
GCGGCGGCGT TCGAGGTCGA CATCAAGGTC GACATCCGCG ACATCTTCAG CGTGCTGGTG
AATGCGCCCG AGCACAGCGA GCGCGTCGCC GAGGTGGCGC GCAGCATCGT CGGCGACGCC
AATGTGAAGA CCCGCGAAAC GCCGAAGATG GGCAGCGAGG ATTTCGCCGA TATGCTGCAG
GCGGTGCCCG GTGCGTATTT CTGGATCGGC CACGACGGCA ATGTGCCGCT GCACAATCCC
GGCTTCGTGC TCGACGACAA GATCCTGCCG GTCGGCGCCA GCATGTTCGC CCGGCTGATC
GAAACCCGGC TGCCGGTCGG CGGCCACGAC GGAGCTACGC ATGTCTGA
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| Protein sequence | MPTIDRIDAF ADEMTAIRRD LHAHPEIGFE EVRTSSIVAE KLGQWGIEVH RGIGGTGVVG
VLKGKGDGGR RIGLRADMDA LPMDEATNLP WRSTIPGRFH GCGHDAHTTM LLGTARYLAE
TRNFDGTVHF IFQPAEEGLG GARAMLKDGL FEKFPCDEVY GLHNAPDLGH GEIAIRPGPA
MAGADFFDIT ISGYGAHGAM PERSKDPVVI AMTLGQALQT IVSRNVDPLQ SAVLSITQIH
SGSAYNVIPG EARLAGTVRA FSDEIRNLIR TRMRAVAAGI AAAFEVDIKV DIRDIFSVLV
NAPEHSERVA EVARSIVGDA NVKTRETPKM GSEDFADMLQ AVPGAYFWIG HDGNVPLHNP
GFVLDDKILP VGASMFARLI ETRLPVGGHD GATHV
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