| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3927 |
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| Symbol | |
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| ID | 6411607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4212723 |
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| End bp | 4214225 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642713808 |
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| Product | DNA-cytosine methyltransferase |
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| Protein accession | YP_001992899 |
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| Protein GI | 192292294 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0270] Site-specific DNA methylase |
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| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.427822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACAT CTACAGCAAT CCGTCAGAAG CTTGCGCGGC TTCGAGGGGG CGGAAAAGTC
CGTGTCTTAG ATTTGTTTTC GGGCTGCGGG GGGCTGTCTT TAGGCTTTCA TGCCGTCGGG
TGTGAGATTG TCGCTGCTGT TGAGCATGAT CCCGATGCCG CCAAATCGCA TGGTCTAAAC
TTCCATGCCG GCTCACCGGT CCACATGGAG CCTCGCGATA TATCGTCCAC TCCGCCTGCG
AACCTCACCA AGGCTCTGGG CCTGGGGCAC CATTCGCTTG CTTTTGACGT TGTGATTGGG
GGGCCCCCTT GCCAAGCGTT CGCCCGCGTG GGTCGATCCA AGCTTCGTGA AGTTGCCGAC
CACCCCGAAG CGTTTAGGCA CGATCCCCGC GCTCGTCTGT ATATCGAGTA TCTCGATTAC
GTCGAGGAAT GCGCGCCTCT TGCTGTCCTG ATGGAGAATG TTCCCGATGT TCTCAATCAT
GGAGGTCACA ACATCGCTGA GGAAATCAGC GAAGTTCTGG AGAGCCGAGG CTATCGTTGC
GGCTACACTT TGCTGAACGC TGCGCGCTAT GGCGTACCGC AGATGCGGGA GCGCATGTTT
TTGATCGCGT ATCGAAAAGA ACTGCAACAG ACCGTCGAGT TTCCCAAGCC GACGCATTGG
GTAGATCTGC CAGCCGGGTA TGAAGGTTCA AGAGCGGTCG CGCTAAAATT GCTTTCAAGA
GATTTGTTCT CTGAAAGCGG ACACTATGTC CCGGCGCCTG ACGCTGGCCG AAATCTGAAG
CCCGCAGTAA CAGCAAAACA GGCCATTGGG GATCTGCCAA CCATTTATGC ACGCAAGTTG
CTGGCTGATG GCCTGCTTAC CCGAGGCGCG CGCCGGTTCA ACGTGCCAAT CGCCTTCAAT
CGCCCACGTT CGATCAGCCG ATACGCGGAG GAGATGCGGT CTTGGCCAGG TTTCCCTGCA
AAGGCGGCCC TATATGATCA CGTAATTCGT TATCTGCCGC GCGACTACGA GCTTTTTTCT
CGCTTGCGCC CAGGCGATCA GTATCCGCAG GCCTATCAGT GTGCACTTAA GATGTTCGAA
GAGAAGCTCG CGCAGCTTCG GAAGAAGAAG GCTGCGCCTG AGTCTGGTAC AGCTGCTTGG
AACAGACTGC GAGATAGTAT CGTTCCGCCA TACGATCCTG ACAAATTTCC CAACAAGTGG
CGAAAAATGG AGGAGGACTG GCCGGCCCGC ACTCTGATGG CTCACTTGGG CAAGGATAGC
TATAGCCATA TCCACTACGA CAGCGATCAA GCCCGTACCA TCTCTGTTAG GGAAGCGGCG
CGTCTGCAGT CGTTTCCCGA CGGCTTTGTA TTCTCTGGGA CTATGAATCC TGCGTTCCGG
CAGATCGGAA ATGCGGTGCC ACCACTGCTT GCAAAACGCC TTGCTGAGAT GCTCGTTAGT
AGGATGCGCG CCGGCGTAGC GGCCAAGGAA GCCACCAATG AGTTGGCGGA GGCCGTTGGA
TGA
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| Protein sequence | MATSTAIRQK LARLRGGGKV RVLDLFSGCG GLSLGFHAVG CEIVAAVEHD PDAAKSHGLN
FHAGSPVHME PRDISSTPPA NLTKALGLGH HSLAFDVVIG GPPCQAFARV GRSKLREVAD
HPEAFRHDPR ARLYIEYLDY VEECAPLAVL MENVPDVLNH GGHNIAEEIS EVLESRGYRC
GYTLLNAARY GVPQMRERMF LIAYRKELQQ TVEFPKPTHW VDLPAGYEGS RAVALKLLSR
DLFSESGHYV PAPDAGRNLK PAVTAKQAIG DLPTIYARKL LADGLLTRGA RRFNVPIAFN
RPRSISRYAE EMRSWPGFPA KAALYDHVIR YLPRDYELFS RLRPGDQYPQ AYQCALKMFE
EKLAQLRKKK AAPESGTAAW NRLRDSIVPP YDPDKFPNKW RKMEEDWPAR TLMAHLGKDS
YSHIHYDSDQ ARTISVREAA RLQSFPDGFV FSGTMNPAFR QIGNAVPPLL AKRLAEMLVS
RMRAGVAAKE ATNELAEAVG
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