Gene Rpal_3920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3920 
Symbol 
ID6411600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4205314 
End bp4206507 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content72% 
IMG OID642713801 
Productmonooxygenase FAD-binding 
Protein accessionYP_001992892 
Protein GI192292287 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGTCT CCCGAACCAT TATCGTCGCC GGAGCCGGCA TTGGCGGGCT GACGGCGGCA 
TTGGCTTTGG CCGCCAAGGG TTTCCGGGTT ATTGTGCTGG AACGTACCGA GCGCCTCGAC
GAAGTCGGCG CCGGTCTGCA GCTTTCCCCC AACGCCTCCC GAATTCTGGT CGAGCTCGGC
CTGCAGCCGC GGCTGGATGC CTGCGCGGTA GTGCCCGACG CCGTCACTGC CATTAACGCC
CGCTCGGGCC GCGCTATCGT CCGGATGCCG ATCGGCAACG TCGCCGTCCG CAATGGCGCG
CCCTACTGGG TGGTGCATCG CGCCGACCTG CAAGCGGCTC TAGCGGCCCA GGTCGCCGCG
CACCCCTCGA TCGACCTCCG GCTTGGCTGC GCGGTCGAAG ACGTCGCCCC CCACGCCAAC
GGCGTCACCG TGTCGGCGGG CGGCGGGCAG GAACCGGGGC TGGCGCTGAT CAGTGCCGAC
GGCATCTGGT CGGCCGTGCG TGGCGTCGCC TTTCCCAAGA CCCAGCCGCT GTTCTCGGGC
CTGATCGCCT GGCGCGGCAC GATTCCGGCC GAGGCGATGC CGGATGGGGA GAGGCTGCGC
GGAGTGCAGC TTTGGCTGGG GCCGGAGGCG CATCTGGTGG TGTATCCGAT CTCCAGTGGG
CGCCGGATCA ACCTGGTGGC GGTGGTCAAC GGCTCGTGGA ACCAGCGCGG CTGGAGCGCG
CGGGGCGAAC CGACTGAGAT TGTCGCGCGT TTCGCCCATT GGGCGGGGGC AGCCCGGGCC
CTGATCGGAA CCGTCGAAAA CTGGACGCGC TGGGCGCTGT TCGCGATGCC GGACGGCGGG
GTGTGGAACC AGGGCCCGAT CGCCATGCTG GGCGACGCCT CCCACGGCAT GCTGCCATTC
GCCGCCCAGG GCGCCGGCAT GGCGATCGAG GACGCCGCCG TACTGGCCGC CGGCCTTGCC
GCCAGCCACG GCGAGGGCCG CGGCGGCACC GCGGCCGAGG TCGCTGCAAC GCTGCAGCGC
TACGCGGCGC TGCGCCGGCC CCGGGTCAGG CGGGTGCAGC AGCTCGCCCG GCAGAACGGG
GTGATCTACC ACCTGCCAGG CGCTGCGGCG ATCGCCCGCG ATGTCGCGAT GCGGGCGCTC
GGCCCGGACC GGCTGCTGGC GCGGCAGAGC TGGATCTACG ACTGGCGCCC CTGA
 
Protein sequence
MAVSRTIIVA GAGIGGLTAA LALAAKGFRV IVLERTERLD EVGAGLQLSP NASRILVELG 
LQPRLDACAV VPDAVTAINA RSGRAIVRMP IGNVAVRNGA PYWVVHRADL QAALAAQVAA
HPSIDLRLGC AVEDVAPHAN GVTVSAGGGQ EPGLALISAD GIWSAVRGVA FPKTQPLFSG
LIAWRGTIPA EAMPDGERLR GVQLWLGPEA HLVVYPISSG RRINLVAVVN GSWNQRGWSA
RGEPTEIVAR FAHWAGAARA LIGTVENWTR WALFAMPDGG VWNQGPIAML GDASHGMLPF
AAQGAGMAIE DAAVLAAGLA ASHGEGRGGT AAEVAATLQR YAALRRPRVR RVQQLARQNG
VIYHLPGAAA IARDVAMRAL GPDRLLARQS WIYDWRP