| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3912 |
|---|
| Symbol | |
|---|
| ID | 6411592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 4199499 |
|---|
| End bp | 4200029 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642713793 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001992884 |
|---|
| Protein GI | 192292279 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCT ACGAACTCGA CGGCCACCGG CCGGATCTTC CGGCAGATGG AAATTGCTTC
ATCGCTGACA GCGCGTCGGT GGTCGGCAAG GTTCGCCTCG GTAGTTCGGT CTCGGTCTGG
TTTGGTGCCG TTCTGCGCGG CGACAACGAA TGGATCGAGA TCGGCGAGGG CTCCAACATT
CAGGACGGCA CGACCTGCCA CACCGATCCG GGCTTTCCGC TCAGGGTCGG CAAGGGCTGC
ACCATCGGCC ACAACGTCAT CCTGCACGGC TGCACCATCG ACGACAGCGT CCTGATCGGG
ATGGGTGCGA TCGTAATGAA TGGCGCCAAG CTGGCGCGTG GCTGCGTGGT TGGGGCAGGT
GCCGTAGTCA CCGAAGGCAA GTCTTTCCCA GAGAACTCTC TGATCCTTGG AGCGCCGGCC
AAGGTCGCGC GGACGCTCAC CCCCGAACAG GTCCAGGCGA TGCTGGCGGG CGCGGGCTTT
TATGTCGCCA ACGGCCAGCG CTACGCCAAG GGGCTTAAAA AGATCGGGTG A
|
|---|
| Protein sequence | MAIYELDGHR PDLPADGNCF IADSASVVGK VRLGSSVSVW FGAVLRGDNE WIEIGEGSNI
QDGTTCHTDP GFPLRVGKGC TIGHNVILHG CTIDDSVLIG MGAIVMNGAK LARGCVVGAG
AVVTEGKSFP ENSLILGAPA KVARTLTPEQ VQAMLAGAGF YVANGQRYAK GLKKIG
|
|---|
| |