Gene Rpal_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3908 
Symbol 
ID6411588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4196255 
End bp4196842 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content60% 
IMG OID642713790 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001992881 
Protein GI192292276 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCATC GGACTAGGGA GCAGCATCAC GACGAAGCCG TTGCGCGGCC GTCGTTGGTG 
AGCCAGCCGC TGCAGGCGGA GCGGGTCGAG GAACCGCCCA GTGTTTCAGA GGCGTATGCG
CATCGCGATT TCGGTCTGTC GCATCAGGTG ATTTGGGATT TCGTCTCGAT CAGCAACAAT
CTCGAGGACA TGCGCCGCGC GTGGGCCAAG CTATTCGGGA TCAGCGGATC GCAATGGCTG
ATTCTGATGG CCATCGCTGA TCTGGACCAG GGAAATGGCG TTTCCGTAGG CGACGTGTCA
CACAAGATCC ACGCCGTCTC GACCTTTGTG ACAACCCAAA CCAAGATCCT GGAGCGGATG
GGGCTGCTCA ATCGGGTGCC TTCGACGGAA GATGCTCGCG TGGTGCTGAT GTCGCTGTCC
GATGAAGCGC GCACCAAGAT CGACCGTCTG TCGCCGCGCT GGGAGGCCTT GCACGCGTAT
ATCTTCAGCG ACTTCGACGC CGAGGCGCTT AATGACGTCA AGGCCAAGCT CGAAATGCTG
AAAAACCGTA CCAAGGAGGC GATGCTGCGG GTGCTCGACG AGCCGTGA
 
Protein sequence
MPHRTREQHH DEAVARPSLV SQPLQAERVE EPPSVSEAYA HRDFGLSHQV IWDFVSISNN 
LEDMRRAWAK LFGISGSQWL ILMAIADLDQ GNGVSVGDVS HKIHAVSTFV TTQTKILERM
GLLNRVPSTE DARVVLMSLS DEARTKIDRL SPRWEALHAY IFSDFDAEAL NDVKAKLEML
KNRTKEAMLR VLDEP