Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3908 |
Symbol | |
ID | 6411588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4196255 |
End bp | 4196842 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642713790 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_001992881 |
Protein GI | 192292276 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCATC GGACTAGGGA GCAGCATCAC GACGAAGCCG TTGCGCGGCC GTCGTTGGTG AGCCAGCCGC TGCAGGCGGA GCGGGTCGAG GAACCGCCCA GTGTTTCAGA GGCGTATGCG CATCGCGATT TCGGTCTGTC GCATCAGGTG ATTTGGGATT TCGTCTCGAT CAGCAACAAT CTCGAGGACA TGCGCCGCGC GTGGGCCAAG CTATTCGGGA TCAGCGGATC GCAATGGCTG ATTCTGATGG CCATCGCTGA TCTGGACCAG GGAAATGGCG TTTCCGTAGG CGACGTGTCA CACAAGATCC ACGCCGTCTC GACCTTTGTG ACAACCCAAA CCAAGATCCT GGAGCGGATG GGGCTGCTCA ATCGGGTGCC TTCGACGGAA GATGCTCGCG TGGTGCTGAT GTCGCTGTCC GATGAAGCGC GCACCAAGAT CGACCGTCTG TCGCCGCGCT GGGAGGCCTT GCACGCGTAT ATCTTCAGCG ACTTCGACGC CGAGGCGCTT AATGACGTCA AGGCCAAGCT CGAAATGCTG AAAAACCGTA CCAAGGAGGC GATGCTGCGG GTGCTCGACG AGCCGTGA
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Protein sequence | MPHRTREQHH DEAVARPSLV SQPLQAERVE EPPSVSEAYA HRDFGLSHQV IWDFVSISNN LEDMRRAWAK LFGISGSQWL ILMAIADLDQ GNGVSVGDVS HKIHAVSTFV TTQTKILERM GLLNRVPSTE DARVVLMSLS DEARTKIDRL SPRWEALHAY IFSDFDAEAL NDVKAKLEML KNRTKEAMLR VLDEP
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