Gene Rpal_3899 details

Gene Information

• Locus tag: Rpal_3899
• ID: 6411579
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 4186571
• End bp: 4187140
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 642713781
• Product: protein of unknown function DUF1457
• Protein accession: YP_001992872
• Protein GI: 192292267
• COG category: [S] Function unknown
• COG ID: [COG5388] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCATC CGTCGAGCCA GGCGTTCTTC GCCTATTGGG ACAAGCAACG CGACGGCGCC 
CCTGCCCCGG ATCGCAGCGC GATCGAGCCG GGTGCGTTGC GCAGCCTGCT CGGGGACATG 
TTCGTGGTGT CGTGCGATGC GCCCGGATAC CCGTTCCGGT TCGCCGGTAC CCGGCTGAAC 
GCCCTGCTCG GCCGTGACCT CAAGGGCGAG AAGCTGACCA ACCAGTTCAT GCTGGAGCAG 
CGGCGCTCGA TCGAGCAGGT GCTGGACATC GTATCAGGGG ATACCGTCGC GGTGGTCGCC 
GGTATCCTCG CCACCACCAC GAATGCGACG CCGGTCACGC TGGAGCTGCT GCTCCTCCCA 
TTCGCCCAAC GCCCCCACAC GCCCCTCAGC ACCACCGGCC TTCTGACCCC CCTCGGCAGC 
CGGGTCATCG GGCCGCTGAT GAGCCTGCGG CTCACCTCAT GGCGAACGGT CGGCCAGCAG 
CCGCGCCGCT TCCCGCCACG CAAGCTGCGG AAGTTTCAGG TGATCCGAGG ACTGACGGTC 
TACGAGGGCA GCCGCGGGGA CTCGGCGTAG 

 

Protein sequence

MKHPSSQAFF AYWDKQRDGA PAPDRSAIEP GALRSLLGDM FVVSCDAPGY PFRFAGTRLN 
ALLGRDLKGE KLTNQFMLEQ RRSIEQVLDI VSGDTVAVVA GILATTTNAT PVTLELLLLP 
FAQRPHTPLS TTGLLTPLGS RVIGPLMSLR LTSWRTVGQQ PRRFPPRKLR KFQVIRGLTV 
YEGSRGDSA