| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3892 |
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| Symbol | |
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| ID | 6411572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4179175 |
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| End bp | 4180206 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642713774 |
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| Product | Patatin |
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| Protein accession | YP_001992865 |
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| Protein GI | 192292260 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGAAA ATCTGATCGG ACGCGGGCAA GCGCACCCGC CGGCAGCGGA CAAGGTCGGC
CTCGACACCA TTCGCCGGCC GGTGATCGGC TTGGCGCTCG GCGGCGGCGC GGCGCGCGGC
TTTGCGCATA TCGGTATCCT GCGCACCCTG CTGGCGCACG GCATTACGCC CGACGTGGTG
GTCGGCACCT CGATCGGCGC CGTGGTCGGC GGAGCCTATG TGTCCGGTCA TCTCGACACG
CTGGAGGAGT GGGCGCGGCG ACTGCAGCCC CGCAACATCT TCGGCTATCT GGATATTCGG
CTCAATGGTT CCGGCCTGAT CGGCGGCAGC AAACTCGCCG CGCAGCTCGA CGCCACGCTC
GGCCAGATCC TGATCCAGGA TCTCACCCAA AAGTTCGCCA GCGTCGCCAC CGAGGTGGCC
ACCGGTCACG AGATCTGGCT GACCCACGGA CGGATCGTCG ACGCGGTCCG CGCCTCCTAC
GCCCTGCCCG GCATCTTCTC GCCGGTGCTG ATCGGCGACC GCTGGCTGGT CGACGGTGCG
CTGGTCAATC CGGTGCCGGT GTCGGCCGCG CGGGCGCTCG GCGCCGAGAT CGTGATCGCC
GCCAACGTCT CCAGCGACGT GTTCGGCCAC GGCACCACGA TCTTCTCGCA TGGCAGCGCC
GCTGCGGCGG CAATGGAACC CGAAGCCGAG GAACCGCCGG CGCAGAAGCG CGGCTTCACG
CGGTTCTTCT CGCCTGAGAG ATTCGTCAAA CAGGAGCTGT TCGGCAGCCC GGAGCGCCCC
GGCATCTCCA AGGTGATGAC CGATGCCTTC AATATCATGC AGGACCGCAT CACCCGGGCG
CGGCTCGCCG GCGATCCCCC GGACCTGCTG ATTTCGCCGC GGGTCGGCCG GATCGGCTGG
TTCGACTTCC ACCGCGCCGA CGAGATCATC GCCCACGGCG CCCGCGCCGC GGAGCGCGCG
ATCGACTCGA TCCGCGAAGC GATCGAAGAA GTCGCGCCGC AGCCAAAGGC CACGGTTCCG
GTCGAGACCT GA
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| Protein sequence | MLENLIGRGQ AHPPAADKVG LDTIRRPVIG LALGGGAARG FAHIGILRTL LAHGITPDVV
VGTSIGAVVG GAYVSGHLDT LEEWARRLQP RNIFGYLDIR LNGSGLIGGS KLAAQLDATL
GQILIQDLTQ KFASVATEVA TGHEIWLTHG RIVDAVRASY ALPGIFSPVL IGDRWLVDGA
LVNPVPVSAA RALGAEIVIA ANVSSDVFGH GTTIFSHGSA AAAAMEPEAE EPPAQKRGFT
RFFSPERFVK QELFGSPERP GISKVMTDAF NIMQDRITRA RLAGDPPDLL ISPRVGRIGW
FDFHRADEII AHGARAAERA IDSIREAIEE VAPQPKATVP VET
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