Gene Rpal_3883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3883 
Symbol 
ID6411563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4167056 
End bp4167706 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID642713765 
ProductO-methyltransferase family 3 
Protein accessionYP_001992856 
Protein GI192292251 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCC TGACCACCTC TCCGCTGGCC CCGCTGCTGA CGCGGCTGTT CGCTGAAGCC 
GACGCCGCGC AGCCGCAGCT CGACCAGCTC GCACCCGACA CGATGCGGCT GATGCGCAGC
AAGACCGACT ACACGACGCT GTACGGTCGG CTGAAAGACT ACGCCCTCGC CGTGTCACCC
GAGACCGGCG CGCTGCTCTA CATGCTGGCG AGAGGCTGCC GCGCCCGGAC CATCATCGAG
TTCGGCACCT CGTTCGGGAT TTCGACGCTG CACCTCGCCG CAGCGCTGCG CGACAATGGC
GGCGGCCGGC TGATCACCAC CGAGTTCGAG CACGCCAAGC TGGTCCGCGC CGAGGCCAAT
CTCGAAGCCG GCGACCTTGT CGATCTGGTC GAATTCCGCG AAGGCGATGC GCTGCAGACG
CTCAGCAAAG ACTTGCCCGA TCGCATCGAC CTCGTGCTGC TCGACGGCGC CAAGGCGCTG
TATGCCGACG TTCTCGACCG GCTCGAAGGC CGGCTTTCGC CCGGCGCGCT GATCGTCGCC
GACAACGCTG ATCACTGCCC GGACTATCTC GCTCGGGTGC GCGATCCGGC GCAGGGCTAT
CTGTCGGTGC CGTTCGCCGG CGATGTCGAG CTGTCGATGC GGCTCGGCTG A
 
Protein sequence
MTTLTTSPLA PLLTRLFAEA DAAQPQLDQL APDTMRLMRS KTDYTTLYGR LKDYALAVSP 
ETGALLYMLA RGCRARTIIE FGTSFGISTL HLAAALRDNG GGRLITTEFE HAKLVRAEAN
LEAGDLVDLV EFREGDALQT LSKDLPDRID LVLLDGAKAL YADVLDRLEG RLSPGALIVA
DNADHCPDYL ARVRDPAQGY LSVPFAGDVE LSMRLG