| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3875 |
|---|
| Symbol | |
|---|
| ID | 6411555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 4162348 |
|---|
| End bp | 4162737 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642713757 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001992848 |
|---|
| Protein GI | 192292243 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0759] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00278] conserved hypothetical protein YidD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTAC CAAGTCGCGG AACTGATTGG ATCGCACCGG TGCTTCGGCT GCCGCGCAAC
GCCGGCCGCG GACTGATCTG GCTGTATCGC CACACGCTAT CGCCGCTGGT CGGTTACAAC
TGCCGGCACT ATCCGACCTG TTCGATGTAC GGGGACGAAG CGATCCGCAA ATTCGGACTG
TGGGCGGGTG GCTGGATGAC GCTGGCGCGG CTGTTGCGCT GCCAGCCATG GGGCACGTCC
GGCATCGACC TGGTTCCGCA AACTGCCCCG AGCCGCGCGC GCTGGTATCT GCCCTGGCGC
TACGCCCGCT GGCGCGGTGT CAACGCGCCG CCGCCCGATG TGGCCGAGCC GTGCGGCTGC
GGCTCACATT CACAGCTTAC GCCGCACTGA
|
|---|
| Protein sequence | MQLPSRGTDW IAPVLRLPRN AGRGLIWLYR HTLSPLVGYN CRHYPTCSMY GDEAIRKFGL
WAGGWMTLAR LLRCQPWGTS GIDLVPQTAP SRARWYLPWR YARWRGVNAP PPDVAEPCGC
GSHSQLTPH
|
|---|
| |