| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3874 |
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| Symbol | |
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| ID | 6411554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4161217 |
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| End bp | 4162107 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642713756 |
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| Product | hypothetical protein |
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| Protein accession | YP_001992847 |
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| Protein GI | 192292242 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3904] Predicted periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.688417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGACGCG CGGTTCTCTC TTGTCTGAAC GGTGGGGCGC TGGGGCGGTT GGCAGCGCTC
GGCATCGTTC TACTCGGGTT CGCGGCCGAC AGCAGTATTC CTGTCACGGC CGGCGCCGGC
AGTCTCGAGG CGCGGCGGCA GCCGATGAAG TTCGGCTGGG TCGCCTGTGA TCCGGATTGC
GGCGGTTGGA TCAGCGCCGT CGGCATCGTC ACAACCGACA CGCCGAAGGA TTTCGAGGAC
TTCGCCCGCG ATCGCAAGCT CGGCGGCGCC ACCGTGGTGC TGGATTCCAG CGGCGGCTCG
GTCAACGACG CGATCACGCT CGGCCGTCGC TGGCGCAAGC TCGGGCTGGC CACCACGGTC
GGCACCAGCG TGCCGTCTGC GTCGCCGCTC GGCAGCCGCG CCCGGATCGA GCCCGGTGCC
TACTGCGAAT CGATGTGCGT GTTTCTGCTG CTCGCCGGCA ATTCCCGCTA TGTGCCGGAA
GGGGCTCACG TGCGGGTTCA CCAGATCTGG ATGGGTGACC GCGCCGAGGA TGCCCGCGCC
GCCAGCTACA GCGCGCAGGA CATGTCGATC GTCGAGCGCG ACATCGGCCG GCTGGCGAAG
TTCACCTTCG AGATGGGCGG CACCGGCGAT CTGTTGTCGC TCGCCCTCAG CGTGCCTCCG
TGGGAAGACC TGCACGAGCT GTCGCGAACC GAGTTGCGCG ACACCAATCT GATCACCACC
CAGGCGATCG CCGATCTGCT GCCCGGCCTC GGTGGCGCAC CGGCCAAGAC CGTGGCGTCG
GCGGAGCCGA AGCCGGTGCA GGACCGCTTC ACCCCGCAGC CGGCGGCCGC CACCAAGACC
GCCGAGGCGC TTCCGACCGG CGGCACGGCC GCCGCGCAGC CGGGGCACTG A
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| Protein sequence | MGRAVLSCLN GGALGRLAAL GIVLLGFAAD SSIPVTAGAG SLEARRQPMK FGWVACDPDC
GGWISAVGIV TTDTPKDFED FARDRKLGGA TVVLDSSGGS VNDAITLGRR WRKLGLATTV
GTSVPSASPL GSRARIEPGA YCESMCVFLL LAGNSRYVPE GAHVRVHQIW MGDRAEDARA
ASYSAQDMSI VERDIGRLAK FTFEMGGTGD LLSLALSVPP WEDLHELSRT ELRDTNLITT
QAIADLLPGL GGAPAKTVAS AEPKPVQDRF TPQPAAATKT AEALPTGGTA AAQPGH
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