| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3844 |
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| Symbol | |
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| ID | 6411523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4133799 |
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| End bp | 4134626 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642713725 |
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| Product | RNA methyltransferase, TrmH family, group 3 |
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| Protein accession | YP_001992817 |
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| Protein GI | 192292212 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA GACCGCCGAA TCCCCGCTTT TCCCGCCGCG ATGGCCCGCC CCGCGGCAAG
CCCCGCCCAG CCGGGTTCCG CCGCGACCCT CGTGAGCGCG ACGGCGACGG GCCCGTGATC
CTGTACGGCT GGCACACTGT GACGGCGGCG CTGGCCAATC CGCAGCGGAA GTTCCGCAAG
CTGTGGCTGA CCGAAAATGC CGCCCGCAGG CTGGCCGAGG AGAACATCGA CACCCGAATC
GCGCCGGAGA TCGTCCGGCC GTCGGAGATC GACCGCCAGC TCGGGCCGGA CGCGGTGCAT
CAGGGCATGC TGGCCGAGGC CGATCCGCTG CAGGGGCCGC GAATCGACAC CCTCCCCCAG
CACGGCATCG TGCTGGTGCT CGACCAGATC ACCGATCCGC ACAATGTCGG CGCGATCCTG
CGCTCGGCGG CGGCGTTCGC CGTGCAGGCG ATCGTCACCA CCGCCCGGCA CAGCCCGGAA
GCCACCGGCG TGCTCGCCAA GTCTGCCTCC GGCGCGCTGG AGCTGGTGCC GCTGGTACTG
GTGCAGAACC TCGCCCGGGC GCTGACCGAG CTGAATGACC GCGGCTTCCT CACCGTCGGT
CTCGACAGCG AGGGTGACGA CGACCTCGCC GCGGTCGAAC TGCGCCAGCC GCTGGCCCTG
GTGCTCGGCG CCGAGGGCAA GGGCCTCCGG CAGCTGACCC GGCAGACCTG CAACACCGTC
GCCCGGCTCG ACATGCCCGG CGAGATCAAG AGCCTCAACG TGTCGAACGC GGCCGCACTG
GCGTTGTACA TCGGCGCCAG CCGGCTCGGC CTGATGGGTC GTCGCTAA
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| Protein sequence | MSDRPPNPRF SRRDGPPRGK PRPAGFRRDP RERDGDGPVI LYGWHTVTAA LANPQRKFRK
LWLTENAARR LAEENIDTRI APEIVRPSEI DRQLGPDAVH QGMLAEADPL QGPRIDTLPQ
HGIVLVLDQI TDPHNVGAIL RSAAAFAVQA IVTTARHSPE ATGVLAKSAS GALELVPLVL
VQNLARALTE LNDRGFLTVG LDSEGDDDLA AVELRQPLAL VLGAEGKGLR QLTRQTCNTV
ARLDMPGEIK SLNVSNAAAL ALYIGASRLG LMGRR
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