Gene Rpal_3831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3831 
Symbol 
ID6411509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4116931 
End bp4117440 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content54% 
IMG OID642713712 
ProductPRC-barrel domain protein 
Protein accessionYP_001992805 
Protein GI192292200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAACC GCACATTGCT TCGTCTCGGC ACCCTGTCCA TTGCGTTCGC AACCGCTGCA 
ACGGTGGCGC TCGCTCAGAG CAAGTCTCCT TCCGAAACTA ACAATGGTCC CAACACGACA
GCAGTCCAGT CGAATGCTTC TACGCCAGCA AAAGCGAGCA CGGAAGAAAG AGGCTTTCAG
GTTGCTAACA CAGCAACAAT GGCCGTTCGC TTTGTTACCG TAAAGCCGGC GGACTTCATG
ACGTCACGAC TCGTGGGCGC AACTGTTTAT AATAATCAGA GCGAGTCGCT CGGCGAAATC
TCCGACCTCG TGGTGGACAA CGGAAAGACG ATCAGTGGCG TAGTGGTCAG TGTCGGCGGC
TTCCTCGGCA TGGGCGAGAG CTACGTCGTT CTCGATCCGT CGACGGTCGT CTTGAATGAC
AAGGATGGTA CGTGGCGCGC GTTTGTTGAT ACAACAAAAG ACAACCTCAA GGCCGCGCCG
AAGTTTAAAT ATTCCAAGAA GTCGAGCTAG
 
Protein sequence
MTNRTLLRLG TLSIAFATAA TVALAQSKSP SETNNGPNTT AVQSNASTPA KASTEERGFQ 
VANTATMAVR FVTVKPADFM TSRLVGATVY NNQSESLGEI SDLVVDNGKT ISGVVVSVGG
FLGMGESYVV LDPSTVVLND KDGTWRAFVD TTKDNLKAAP KFKYSKKSS