Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3824 |
Symbol | |
ID | 6411502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4107587 |
End bp | 4108438 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642713705 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_001992798 |
Protein GI | 192292193 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCCG CGCAAAACTC CAGACTGGTC ATTTACGCGG CCCTCGCCGG CAACGCTTTA GTTGCGCTCA GTAAGTTCGG GGCCGCCGCC TGGACCGGTA GTTCGGCGAT GCTCAGCGAA GCGATTCATT CGCTGGTCGA TACGGTCAAC CAGCTGCTGA TGCTGTACGG CTTGCACCGC GCGGCGCAGC CGGCCGACGC CGGGCATCCG CTTGGGTACG GTCGCGAACT GTATTTCTGG AGCTTCATCG TCTCGTTGCT GATCTTTTCG CTGGGCGCCG GCATTTCCTT GTACGAAGGT ATTCAGCACA TCTTGCGGCC TGAACCGGTT TCCGATCCGC ATGTCAACTA CCTTGTGCTT GCGGCATCGC TGGTGTTCGA AGGAGCGAGC TGGACAGTGG CGATCCGCGA ATTTGAAAAG CAACGCGGCG GCCTGAGCTA TCTGGAGGCG GCGACCCGGA GTCGCGATCC GACGTCCTTC CTGGTGCTGT TCGAAGACAG CGCCGCCGTG ATCGGCATTC TGATCGCAGC GACTGGGACG GCCGCGGCTG AATGGTTGGA AATGCCAGTG CTCGACGGCG TTGCGTCGGT GGGCATCGCA TTGGTGTTGG CGGCGACCGC TGCGTTTCTC GCCCGAGAAA GCAAAGAGCT GCTATTGGGC GAGCCTGCCC GCGAGCAGGT TCGGACATCG ATGAGCGCGA TCGTCACCGG TCATCCCGGC GTTGCCGAGA TCGGCCGGAT GATCACGGTG CATCTTGCGC CGGAGCAGAT CGTAGCGGCC GTCGACGTCG ATTTCGTCGA CGATCTGCGC GCGTCGCAAA TCGAGCAGAC CGCGCTGTCG TTGAGAGTGT GA
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Protein sequence | MAAAQNSRLV IYAALAGNAL VALSKFGAAA WTGSSAMLSE AIHSLVDTVN QLLMLYGLHR AAQPADAGHP LGYGRELYFW SFIVSLLIFS LGAGISLYEG IQHILRPEPV SDPHVNYLVL AASLVFEGAS WTVAIREFEK QRGGLSYLEA ATRSRDPTSF LVLFEDSAAV IGILIAATGT AAAEWLEMPV LDGVASVGIA LVLAATAAFL ARESKELLLG EPAREQVRTS MSAIVTGHPG VAEIGRMITV HLAPEQIVAA VDVDFVDDLR ASQIEQTALS LRV
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