Gene Rpal_3824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3824 
Symbol 
ID6411502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4107587 
End bp4108438 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content62% 
IMG OID642713705 
Productcation diffusion facilitator family transporter 
Protein accessionYP_001992798 
Protein GI192292193 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCCG CGCAAAACTC CAGACTGGTC ATTTACGCGG CCCTCGCCGG CAACGCTTTA 
GTTGCGCTCA GTAAGTTCGG GGCCGCCGCC TGGACCGGTA GTTCGGCGAT GCTCAGCGAA
GCGATTCATT CGCTGGTCGA TACGGTCAAC CAGCTGCTGA TGCTGTACGG CTTGCACCGC
GCGGCGCAGC CGGCCGACGC CGGGCATCCG CTTGGGTACG GTCGCGAACT GTATTTCTGG
AGCTTCATCG TCTCGTTGCT GATCTTTTCG CTGGGCGCCG GCATTTCCTT GTACGAAGGT
ATTCAGCACA TCTTGCGGCC TGAACCGGTT TCCGATCCGC ATGTCAACTA CCTTGTGCTT
GCGGCATCGC TGGTGTTCGA AGGAGCGAGC TGGACAGTGG CGATCCGCGA ATTTGAAAAG
CAACGCGGCG GCCTGAGCTA TCTGGAGGCG GCGACCCGGA GTCGCGATCC GACGTCCTTC
CTGGTGCTGT TCGAAGACAG CGCCGCCGTG ATCGGCATTC TGATCGCAGC GACTGGGACG
GCCGCGGCTG AATGGTTGGA AATGCCAGTG CTCGACGGCG TTGCGTCGGT GGGCATCGCA
TTGGTGTTGG CGGCGACCGC TGCGTTTCTC GCCCGAGAAA GCAAAGAGCT GCTATTGGGC
GAGCCTGCCC GCGAGCAGGT TCGGACATCG ATGAGCGCGA TCGTCACCGG TCATCCCGGC
GTTGCCGAGA TCGGCCGGAT GATCACGGTG CATCTTGCGC CGGAGCAGAT CGTAGCGGCC
GTCGACGTCG ATTTCGTCGA CGATCTGCGC GCGTCGCAAA TCGAGCAGAC CGCGCTGTCG
TTGAGAGTGT GA
 
Protein sequence
MAAAQNSRLV IYAALAGNAL VALSKFGAAA WTGSSAMLSE AIHSLVDTVN QLLMLYGLHR 
AAQPADAGHP LGYGRELYFW SFIVSLLIFS LGAGISLYEG IQHILRPEPV SDPHVNYLVL
AASLVFEGAS WTVAIREFEK QRGGLSYLEA ATRSRDPTSF LVLFEDSAAV IGILIAATGT
AAAEWLEMPV LDGVASVGIA LVLAATAAFL ARESKELLLG EPAREQVRTS MSAIVTGHPG
VAEIGRMITV HLAPEQIVAA VDVDFVDDLR ASQIEQTALS LRV