Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3803 |
Symbol | |
ID | 6411481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4082080 |
End bp | 4083780 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642713684 |
Product | Site-specific DNA-methyltransferase (adenine-specific) |
Protein accession | YP_001992777 |
Protein GI | 192292172 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2189] Adenine specific DNA methylase Mod |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGAA AAACGCGCCT AGAACTAACC TGGATCGGTA AGGATGAGCG GCCGCGGCTG GAGCCGAGAA TATTGATGGA AGATATTGCA CTATCACATC ATGCGTCGGT GCGGCATTCT GAGGCGGACA TCTTCGATAA TCTGCTGATC CAAGGCGACA ATCTATTGGC CCTCAAGGCG CTCGAAGCAA GCTACACGGG CAGGATCAAG TGCGTCATTA TCGACCCGCC ATATAATACG GGTAGCGCAT TCAAGCACTA CGATGACGGT CTTGAGCACT CGCTATGGCT TTCGTTGATG CGTGACAGGC TCGACCTGAT TAGGCGCTTG ATGTCAGAAG ATGGATCGCT TTGGATCACA ATAGATGACA ATGAAGCTCA CTATCTGAAG ATTCTCTGTG ATGAAGTTTT CGGAAGGTCA AATTTTGTAG CGAACGTCGT TTGGCAGAAG AAGTATTCGA AGCAGAATGA TGCGAAGCAT TTCAGTACGA GCCACGACCA CATTCTTGTC TTTGCTAAGA ACAAGAATGA GTGGGCGCCA AACAAGGTTG GAAGAAACCA AAGTCAACTG AAAGGTTATA GCAATCCGGA CGATGATCCA CGCGGACTAT GGACGTCAGT CGTTTATACC TGTTCCAAGA CTCGCGCAGA ACGGCCCAAT CTGTTCTATC CAATAAAGCA CCCGGTTACG GACGTTGATG TTTGGCCAAG TGAAACCAGG GTCTGGGGCT ACGACGAGGC GCGCCATAAG AAGCACGTCG AAGAGAACAT GCTTTGGTGG GGCAAGAACG GCGAACAAGA AAAGCCGAGA ATAAAGGTGT TCTTATCCAA AGTAGGCGAA GGAGTTGTTC CTAGCACTAT CTGGCTTCGC GATGAAGTGG GAGACAATCA AGATGCGCGC CGTGAAGCGA TGGCGCTGAA TTCGGAAGGA TCTTTCTCTA CTCCGAAACC TGAGAGCCTC ATAAGACAAA TGGTCTCCAT CGCTACAGCT CCCGGCGATC TAGTTCTCGA TTCATTTGCA GGCTCCGGCA CCACCGGCGC CGTTGCACAC AAGATGGGGC GGCGCTGGAT TATGGTTGAG CTCGGGGACC ATGCAGTCAC GCACATTGTT CCGCGCCTCA AGTTGGTAAT CAACGGCGCG GACCGGGGTG GAGTCACCGA TGCGGTGGGC TGGAATGGCG GCGGTGGGTA TCGATTCTGT CGGCTCGCTC CTTCGCTTCT CGAAAAAGAT CGCTTTGACA ATTGGGTGAT AGCCAAAGAA TACAACGCCG CTATGCTTGC TGAAGCTCTA TGCAAGCATC TGGGTTTTAC CTATGCGCCT AGCCAGGACG CGGCCGAATA TTGGCGGCAC GGAAATTCGA CCGAGACCGA CTTCATCTAT GTCACTACTC AGTCACTGAC TTACGATGCT TTGAAGAAGT TGTCTGAAGA AGTTGGCCCA AAGCGGACGT TGCTGGTTTG CTGTAAAGCC TTCAATGCGA AGGAGGATAG CTTTCCGAAT CTTACGGTGA AAAAGATACC CCATGCAATT CTCGCGAAGT GCGAATGGGG TCGAGACGAT TATTCCCTTC AGATAGCCAG TCTTACAGAA GAGGTAAAGT CCAAGGATTC CAACGGCTCG GCTGACGATG GAGAAGAAAG GCCCCAACGC CGGAAGTCAA AAACACAATT GCCGCTCTTC GATTCGACGG AGGGTGAGTG A
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Protein sequence | MNRKTRLELT WIGKDERPRL EPRILMEDIA LSHHASVRHS EADIFDNLLI QGDNLLALKA LEASYTGRIK CVIIDPPYNT GSAFKHYDDG LEHSLWLSLM RDRLDLIRRL MSEDGSLWIT IDDNEAHYLK ILCDEVFGRS NFVANVVWQK KYSKQNDAKH FSTSHDHILV FAKNKNEWAP NKVGRNQSQL KGYSNPDDDP RGLWTSVVYT CSKTRAERPN LFYPIKHPVT DVDVWPSETR VWGYDEARHK KHVEENMLWW GKNGEQEKPR IKVFLSKVGE GVVPSTIWLR DEVGDNQDAR REAMALNSEG SFSTPKPESL IRQMVSIATA PGDLVLDSFA GSGTTGAVAH KMGRRWIMVE LGDHAVTHIV PRLKLVINGA DRGGVTDAVG WNGGGGYRFC RLAPSLLEKD RFDNWVIAKE YNAAMLAEAL CKHLGFTYAP SQDAAEYWRH GNSTETDFIY VTTQSLTYDA LKKLSEEVGP KRTLLVCCKA FNAKEDSFPN LTVKKIPHAI LAKCEWGRDD YSLQIASLTE EVKSKDSNGS ADDGEERPQR RKSKTQLPLF DSTEGE
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