Gene Rpal_3780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3780 
Symbol 
ID6411458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp4063029 
End bp4063691 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID642713661 
Producttransglutaminase family protein cysteine peptidase BTLCP 
Protein accessionYP_001992754 
Protein GI192292149 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAACA AGCTGCTCTG TCCGATCCTT TCGCTGGCGG CTGTCATCGT CGTTGTCAGC 
CCCTCAGCGG CACGACCTAT GGCGGGCCGG AGCAGCGCTA TCCAGCTGCT GGCTGAGGTT 
GCCCCGACAT TGGCCCCCTT TCAGCATGTT CGATTCTGCA TCCGTTATCC GTTGGATTGC 
GCCTCCGATC GCGATCAGAC CGACCGCGTC GAACTGTCCC CATCGACACT CAAATTGCTG 
GAAGCAATCA ATCGGAGCGT GAATTCCGAG ATCGCACCAA TCCAGAAGGT CTATGGATCG 
GATTTGAAGA TCGGCTGGAC CATCGGCCCG AAGGCCGGCG ACTGCAACGA CTACGCCGTC 
ACCAAGAGGC ATCGACTGAT TGACAGCGGG CTGCCGGCAC GAGCGCTGCG CCTGTCGGTG 
GTGCGGACCC CCGATCAGAT CGGACACCTC GTGCTCCTGG TCTCAACGAC GGACGGAGAC 
CTGGTGCTCG ACAATCTGAC GCCGTCGATC CGCTCCTGGC AGAATACAGA CTACGAATGG 
CTGAAAATTC AGTCGCGCGC TGACGCGCGT CTCTGGTCTG ATGTCGGCAG GAAGCTCGCC 
GAGCCGGCCG ATCTCAAAGC ACCCGCGCGG CTTCAGCTAG CCGCACAGCG GACCGCCGAA 
TAA
 
Protein sequence
MLNKLLCPIL SLAAVIVVVS PSAARPMAGR SSAIQLLAEV APTLAPFQHV RFCIRYPLDC 
ASDRDQTDRV ELSPSTLKLL EAINRSVNSE IAPIQKVYGS DLKIGWTIGP KAGDCNDYAV 
TKRHRLIDSG LPARALRLSV VRTPDQIGHL VLLVSTTDGD LVLDNLTPSI RSWQNTDYEW 
LKIQSRADAR LWSDVGRKLA EPADLKAPAR LQLAAQRTAE