Gene Rpal_3777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3777 
Symbol 
ID6411455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4057608 
End bp4059956 
Gene Length2349 bp 
Protein Length782 aa 
Translation table11 
GC content60% 
IMG OID642713658 
Productcapsular exopolysaccharide family 
Protein accessionYP_001992751 
Protein GI192292146 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTCG CCGGTCAACC TCTACAAGAT GGTAGCCTGC CTCGTATTGG CACCGGAAAG 
GACGCGCTCT CCCTGCTGGA CCTGAGCGAT TTCGTTGCCC GGCACTGGCG CTTCATCGGT
CTGGTCACCG TGTTCGTGAT GGCGCTCGCA CTCGCCTATT TGGCAGCGGC GCCGTCCAGA
TACACCGCTC AAACCGACAT GATCATCGAC ACCAAACGTG TCACCTGGAC TCAGTCGGAG
TTCGCAACAG AGAACCGGAT GGTCGAGGAC GCCTCGGTCG AAAGCGAGAT CGAGACCACC
AAGTCTGAAA AGGTCGCCCT GCAGGTCATT CGAAAGCTCC GCCTAACCGA GGACCCGGAA
TTCATCGGAT CCGGGACCGG ACTTCGCAAC CGGCTTTATC AGCTTCTGGA CCTGGATGCC
CCGATCTCTC CCCAGCTCAC GCCCAGTGAA CTCGAGGCAC GGGCATTGAG CCGGGTGAAA
GACAATCTCA AGGTGATGCG GCTTGGGCGT TCCTACATCG AGCAGATCTC GTTCACGTCG
CTGGTCCCGG AGAAGGCGGC AGTCATCGCC AACGCCTTTG CGGACGCCTA CATCGAGGAT
CAGATCCAGG CGAAATTCGA GGCGACCCGG CGTGCCAGCG AGTGGCTGCA GCAACGGATC
GGAGAACTGC GCCAGCAGGC CAGCGACGCC TATCGGGCCG TTCAGGATTT CAAGTCGAGC
AACTCGATCA TCGTGAGCGG AGACGGCAAG CTCGCGAGCG ACCTGGAACT CGATCAGCTT
GGCATCTCGC TCGCAAAGGC ACGAGCCGAA ACCAGCCAGG CCAGAGCCAA GCTGGAGCGG
ATCACCCGCG TTCTCGAGCT GCGTCAGGAA AAGGGAAGCA ATGAGATCCC CGATCCGGTC
GTCACCGACG CCCTCAGCAA TCCCGTTATT ACGCGCTTGC GTCAGCAATA TCTCGACAAC
CAGAGCAAGG AAGCCGAATG GAGCTCGCGC TACGGCGCCG AGCATCAGGC CGCGCGCAAT
CTTCGGTCAG AAATGGCCAA CGTTCGACAG GCCATCTGGG ACGAAGTCAG CCGGATCGCC
GAAAGCTACC GCAGCGAGGT CCAGATCGCG AAGACGCAGG AGGACTCGAT CGACAAACGT
ATGATCGAAG TCTTTCAATC ATCGACCGGA ACTCGCCAGG CACAGGTCCA TCTGAGGGAG
CTCGAAACTG CGGCCACCAC CTATCGCGGT ATCTATGAGA CCTTCCTGAC CCGGTTTACT
CAGTCGGTTC AGCAGCAGTC GTTTCCGTCA ACCGAGGCGC GCGTGGTCAC TCTCGCCTCG
CCGCCTTCGG TCCGCAGCTC GCCCAAAACC AATCTGACCC TCGCCCTCGC CGCTATATCA
GGCTTGACGC TGGGCATCCT CGGCGCCTTT GCGCGCGACC GGATGAGCCG TCGGATCCAC
ACCCGCGCTC AACTTGAAAC CATCCTAGGC ACCAGCTGCT TGGCGATCAT CCCCTCCTTC
GCGAATCCGG CACTCACGTC CCAGACCTCC ACCAGCTCGT CTCGTCTGTC GCGGGCAGTG
AAGCAACTTC TCCGTAAGAG AGATCACGTC TCAGGTCAGC CTCGGGAGAG AAGCCAGGCC
AACTCTGCCG CCTTCGAGAA AATCAACGAC GTCGCGCCAT TCTCGGCAAC TGCAGAAGCC
CTCCGCCACA TCAAGGTTGC GATCGACCTG AGCCCCGGAG GAGGACGCGT GATCGGCATC
GTGTCCGCCC GCCCCGGAGA GGGTAAGACC ACCATCTGCG CCAGCTTTGC GGCATTCCTG
GCAAGGAGCG GCGCACGAAC GCTGCTCATC GACGGCGACC TGCGAAATCC GTCCCTGAGC
AGAACACTCG GTTACAAGAA CAAGCGCGGG CTGCTCGAAC TCGTCGCCGA TCAGCTCCAA
TTGAGCGACT TGGTCGTCAC GGATCCGGTC TACAAATTCG ATTTTCTGCC ATCGGCCACG
GAGATGAAGC CGATCAACAG CGCGGACGTG CTCACCTCCC CGTCCGTGAA GCGGATGTTG
AAGTCTGCCG CAGGCAACTA CGATTACATC ATCGTCGATC TCCCCCCCAT TCTGCCGGTG
GTCGACGTGA AAGCTGCGGC GCACCTGTTC GATGCGTTCG TGCTGGTTGT CGAATGGGGC
GCAACGATGA GCGACGAAGT CCGTAGCGCG GTCGGCGTCT CTCGCTCCTT GTCGGAGCGG
CTATTGGGTG CCGTCCTCAA CAAGACGGAC GAAGACGTCA TGCGCCGCCT CGAGGGCTAC
TCGTATCGCA GCCACCATTA TTATTACTAC GGTGCTCCCA AGCACGAGAA TGAGCAGACC
AAAAATTGA
 
Protein sequence
MNFAGQPLQD GSLPRIGTGK DALSLLDLSD FVARHWRFIG LVTVFVMALA LAYLAAAPSR 
YTAQTDMIID TKRVTWTQSE FATENRMVED ASVESEIETT KSEKVALQVI RKLRLTEDPE
FIGSGTGLRN RLYQLLDLDA PISPQLTPSE LEARALSRVK DNLKVMRLGR SYIEQISFTS
LVPEKAAVIA NAFADAYIED QIQAKFEATR RASEWLQQRI GELRQQASDA YRAVQDFKSS
NSIIVSGDGK LASDLELDQL GISLAKARAE TSQARAKLER ITRVLELRQE KGSNEIPDPV
VTDALSNPVI TRLRQQYLDN QSKEAEWSSR YGAEHQAARN LRSEMANVRQ AIWDEVSRIA
ESYRSEVQIA KTQEDSIDKR MIEVFQSSTG TRQAQVHLRE LETAATTYRG IYETFLTRFT
QSVQQQSFPS TEARVVTLAS PPSVRSSPKT NLTLALAAIS GLTLGILGAF ARDRMSRRIH
TRAQLETILG TSCLAIIPSF ANPALTSQTS TSSSRLSRAV KQLLRKRDHV SGQPRERSQA
NSAAFEKIND VAPFSATAEA LRHIKVAIDL SPGGGRVIGI VSARPGEGKT TICASFAAFL
ARSGARTLLI DGDLRNPSLS RTLGYKNKRG LLELVADQLQ LSDLVVTDPV YKFDFLPSAT
EMKPINSADV LTSPSVKRML KSAAGNYDYI IVDLPPILPV VDVKAAAHLF DAFVLVVEWG
ATMSDEVRSA VGVSRSLSER LLGAVLNKTD EDVMRRLEGY SYRSHHYYYY GAPKHENEQT
KN