| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3770 |
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| Symbol | |
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| ID | 6411448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4049331 |
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| End bp | 4050824 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642713651 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001992744 |
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| Protein GI | 192292139 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.700837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTCCG AGAGTCACTC TGAGGCGCCG GTTGGTGCGC GAGCCGCCGC GAGCGCCGGC
CTGCTGGTCG CCTCACGCCT GATCACGCGT TGTATCGATC TGATCACCTT GAGCTTGCTG
GGCCGGCTGC TGACGCCTGC CGACTTCGGC ATCGTAGCCA TCGCGATGTC GGTGATCTTC
ATCGTCGAGG CGGTGATGGA AATCCCGATC GGCGTGGCGC TCATCAGAGT GAGAAATCCC
ACCAAACGAC ACTACGACAC CGCCTTCACC GTGGGGCTGT TGCGGTCCTG TGCCTTGATG
GTGGTCGTGA CCGCGTTGTC GTGGCCGATC GCCGAACTGT ACCGGGATGA AAGGTTGATC
TGGCTGATTG CTGTACTCGG TACTGCGCCC GCAGTCCGGA GCCTGGGAAG TCCGCGGATC
ACTGAATTTA CCCGTCGGAT GGATTATCGG CCGATCGTTG CCCTGGAGGC GATGGGCAAG
CTGACATCGC TGGTGGTGTC GGTCGTGGTT GCCTGGTGCA CGGGGTCGTA TTGGGCGATC
GCTGTCGGGA CGATCGCGAC GCCGCTCACG ATAGCCGTCG CGAGCCACAT CGCGTTCAGA
TATCGGCCGC GGCTGTCGCT GGCCGAATGG GGCGAATTCT CCGCCTTTGT GCGCTGGTCC
ACGATCAATC AGCTTGTCGG GGCCATGAAC TGGCAGATCG ACCAGTTGAT GCTGGGGCGG
ATGGTGAGCC GTCAGGATCT CGGGCGGTTC TCCATGGCAT CAAATCTGGC GTCGTTGCCG
ACCCAGGTGA TCATCGTCCA GCTTCTCAAT CCGCTCACCG TGGCGTTTTC GCTGATCCGC
GACAATCCCA CGCGATTGAA AGATGCGTAT CGGGCAAGCG CCGCGATGAT CGTCTGCGTC
GGCCTTCCGG TGCTGATCGG ACTTGGCCTC GTGGCGGATC CGCTGATCCG CCTGGTGCTG
GGCGAAAAAT GGATCGTGAT CTCGCCGATC GTCGCGTTCA TGGCGTTGTC GATTATTCCG
TCACTGTTCG TGTCGCCGCT ATCGCCGCTG TTGATGTCGT TGAACAGGAC CCAGGCGCTG
TTTCCGATCG CGCTGTCGGA ATTGCTCTTC AAGATGCCGA TTTTGTTGGT CGCGATCTGG
CTGTTCGGGA TGGAGGGGGC GGTCTGGATG CGAATGCTGA CAGCTGTATT CGTGGCAGCG
GTGTCGATGC GGGCGGCACA ACAAACAATT GGCTGGCCGG CGTGGAAGCA GGTCGCAGAG
CATTGGCGTT CGATTGTGGC AAGCGCGGTG ATGGCCGCGG CGGTCTATCC GTTCACCGGT
GACCTGGAGC ACGAGCCGCA AATTGTTCTG ATGGCCGCGA AGTTGCTGGG GGCAGTGCTG
TTGGCTGCGG CAGTCTATGC CGTCGCGATT CTGGCGCTCT GGTTTGTCGC AGGGCGCCCA
ACAGGCGCCG AAGCGAAGAT CGTCAATCTC GTTCGATCGT TCATCAGGCG CTAG
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| Protein sequence | MGSESHSEAP VGARAAASAG LLVASRLITR CIDLITLSLL GRLLTPADFG IVAIAMSVIF
IVEAVMEIPI GVALIRVRNP TKRHYDTAFT VGLLRSCALM VVVTALSWPI AELYRDERLI
WLIAVLGTAP AVRSLGSPRI TEFTRRMDYR PIVALEAMGK LTSLVVSVVV AWCTGSYWAI
AVGTIATPLT IAVASHIAFR YRPRLSLAEW GEFSAFVRWS TINQLVGAMN WQIDQLMLGR
MVSRQDLGRF SMASNLASLP TQVIIVQLLN PLTVAFSLIR DNPTRLKDAY RASAAMIVCV
GLPVLIGLGL VADPLIRLVL GEKWIVISPI VAFMALSIIP SLFVSPLSPL LMSLNRTQAL
FPIALSELLF KMPILLVAIW LFGMEGAVWM RMLTAVFVAA VSMRAAQQTI GWPAWKQVAE
HWRSIVASAV MAAAVYPFTG DLEHEPQIVL MAAKLLGAVL LAAAVYAVAI LALWFVAGRP
TGAEAKIVNL VRSFIRR
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