Gene Rpal_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3754 
Symbol 
ID6411432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4021936 
End bp4022811 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content63% 
IMG OID642713635 
ProductCurli production assembly/transport component CsgG 
Protein accessionYP_001992728 
Protein GI192292123 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.845428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGCA GAGCCGGAGT ATTGGCGTGT GTCTTGCTGG CTGTTTCCTT AGGTGGATGC 
GCTATCACCG GAACCGATAA GGACCCGGTG ACTCCGCCGG CGACCATGGT GGCGTCGACC
AAGACCGGCG TCGTCCTCGA GCAGCTTCCT CCTCCGACCA AGAAGCTCGA CGTCGCCGTC
TACAACTTCC CGGACCTCAC CGGTCAGAAC AAGTCGAACG ACAACTTCGC GGAGTTCTCG
CGCGCCGTCA CGCAAGGCGG CAGCGCGATT CTCACCGATG TGTTGCTGAC CGCCGGCGGC
GGACATTGGT TCGACGTTGC GGAACGCGCC GACCTGCAGC CGCTGCTGCA GGAACGCCAG
ATCATTCAGA ATACGCGATC GGCCCTGCAG GGCGAGAAGG CGCAGAGCCT GCCGCCGCTG
CGATTCGCCG GCGTGCTGCT CGAAGGCGGC ATCGTCGGAT ACGACACCAA CGAGACCACC
GGCGGCATCG GCGCGAACTA CCTCGGTCTC GGCGGCAACA TGCAGTATCG GCAGGACATC
GTCACGGTGT CGCTGCGCGC GGTGAGCGTT CAGACTGGCC GTGTTCTCGC CGCCGTCACG
ACCACGAAGA TCATCTACTC GGTGAACGTC AGCGGCAGCG GCTTCAAGTA TGTCGCGATC
GACAGCTTGC TGCAGGCCGA TGCGGGCTTC ACCAAGAACT CTCCGACCAC CCTGGCGGTG
CGTGAGGGCA TCCAGCTCGC CGTTTATTCG CTGATCTTCG AGGGCGTGAA GAAGGAACTT
TGGAACTTCA AGGATCCGGC CGCCGGCACC GCCTTCATGC GCGAGCTCGA GCTGCAACGG
AAGGCGGCTA TTCCGACCGC CCCGCCCGCG ATGTGA
 
Protein sequence
MDSRAGVLAC VLLAVSLGGC AITGTDKDPV TPPATMVAST KTGVVLEQLP PPTKKLDVAV 
YNFPDLTGQN KSNDNFAEFS RAVTQGGSAI LTDVLLTAGG GHWFDVAERA DLQPLLQERQ
IIQNTRSALQ GEKAQSLPPL RFAGVLLEGG IVGYDTNETT GGIGANYLGL GGNMQYRQDI
VTVSLRAVSV QTGRVLAAVT TTKIIYSVNV SGSGFKYVAI DSLLQADAGF TKNSPTTLAV
REGIQLAVYS LIFEGVKKEL WNFKDPAAGT AFMRELELQR KAAIPTAPPA M