Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3754 |
Symbol | |
ID | 6411432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4021936 |
End bp | 4022811 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642713635 |
Product | Curli production assembly/transport component CsgG |
Protein accession | YP_001992728 |
Protein GI | 192292123 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.845428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGCA GAGCCGGAGT ATTGGCGTGT GTCTTGCTGG CTGTTTCCTT AGGTGGATGC GCTATCACCG GAACCGATAA GGACCCGGTG ACTCCGCCGG CGACCATGGT GGCGTCGACC AAGACCGGCG TCGTCCTCGA GCAGCTTCCT CCTCCGACCA AGAAGCTCGA CGTCGCCGTC TACAACTTCC CGGACCTCAC CGGTCAGAAC AAGTCGAACG ACAACTTCGC GGAGTTCTCG CGCGCCGTCA CGCAAGGCGG CAGCGCGATT CTCACCGATG TGTTGCTGAC CGCCGGCGGC GGACATTGGT TCGACGTTGC GGAACGCGCC GACCTGCAGC CGCTGCTGCA GGAACGCCAG ATCATTCAGA ATACGCGATC GGCCCTGCAG GGCGAGAAGG CGCAGAGCCT GCCGCCGCTG CGATTCGCCG GCGTGCTGCT CGAAGGCGGC ATCGTCGGAT ACGACACCAA CGAGACCACC GGCGGCATCG GCGCGAACTA CCTCGGTCTC GGCGGCAACA TGCAGTATCG GCAGGACATC GTCACGGTGT CGCTGCGCGC GGTGAGCGTT CAGACTGGCC GTGTTCTCGC CGCCGTCACG ACCACGAAGA TCATCTACTC GGTGAACGTC AGCGGCAGCG GCTTCAAGTA TGTCGCGATC GACAGCTTGC TGCAGGCCGA TGCGGGCTTC ACCAAGAACT CTCCGACCAC CCTGGCGGTG CGTGAGGGCA TCCAGCTCGC CGTTTATTCG CTGATCTTCG AGGGCGTGAA GAAGGAACTT TGGAACTTCA AGGATCCGGC CGCCGGCACC GCCTTCATGC GCGAGCTCGA GCTGCAACGG AAGGCGGCTA TTCCGACCGC CCCGCCCGCG ATGTGA
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Protein sequence | MDSRAGVLAC VLLAVSLGGC AITGTDKDPV TPPATMVAST KTGVVLEQLP PPTKKLDVAV YNFPDLTGQN KSNDNFAEFS RAVTQGGSAI LTDVLLTAGG GHWFDVAERA DLQPLLQERQ IIQNTRSALQ GEKAQSLPPL RFAGVLLEGG IVGYDTNETT GGIGANYLGL GGNMQYRQDI VTVSLRAVSV QTGRVLAAVT TTKIIYSVNV SGSGFKYVAI DSLLQADAGF TKNSPTTLAV REGIQLAVYS LIFEGVKKEL WNFKDPAAGT AFMRELELQR KAAIPTAPPA M
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