| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3747 |
|---|
| Symbol | |
|---|
| ID | 6411425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 4013899 |
|---|
| End bp | 4014768 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642713628 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001992721 |
|---|
| Protein GI | 192292116 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCCGG GGCTTAACAA GTTGCGTGTC GCGATCGGCT CTTCGGCGGC GATCGGCTTG
CGGGCGCTGG CGAAACTGCC CTACGGCCCG CAGCTCATTC GCGCCGCGGC GAGCCGCCCC
GGAATTGAAC GCTGGTTGCG GGCGCTATTG TGCGTTTATC AGCCGTTTCC CGACATCGAC
ACCGCGACCC GATATATCCG GCGGTTCATT CCGGCCGGTC ATGAGCACTC CGATGTGGTG
AGCCAGCTCA AGCAGTTCGC GGACGTCACC CGAGAGAGCG ATTACCCGGT CTTGTTCTAT
TTGTCCGGCT ACGCGCCGGG CCTGTCGACG GTGTTCGATC TCGGCGGGGG GATCGGGAAT
CTGTTCTATC CCTACGACCG CGAGTTGCGG CTGCCTGCGA CGCTGCGCTG GATGGTGCAC
GATCTGCCCG ACAAGGAAGA GATCGTGCTG CAGTTCGCCA AATCACGCAA CGAACAGCGG
GTCGGGTTTT CGCGGCGGAT GGAAGATGCC TCCGGGGTCG ATCTGTTTAT CGTCTCCGGG
GCGCTGCATT ATTTCGAAGA CGAACTTGCG GTGATCCTCG GCCGCCTCGC CGAATTGCCG
CGCCTTGTGG TCGTCAATCG GACGCCGTTC TCGCAGGCAG ATCCGATCGT GACCACTCAG
GTGGGCGACG GCTATGTGCA TGCCTGCAAG CTCCACAGCC TGGCGGGCAC GATCGCCGGC
ATGGAGGCCA TTGGATATCG GTTCGTGGCG AAATGGCCGG TGCACGAGCG CGCAAGCCGC
GTGCCGCTGC GGCCTGACCT GAACGATACG TACTGGGGTC TGTTCTTCGT GCTCGACGCC
GACCGCCGGC AACTGGAAGC TTCCCGATAA
|
|---|
| Protein sequence | MVPGLNKLRV AIGSSAAIGL RALAKLPYGP QLIRAAASRP GIERWLRALL CVYQPFPDID
TATRYIRRFI PAGHEHSDVV SQLKQFADVT RESDYPVLFY LSGYAPGLST VFDLGGGIGN
LFYPYDRELR LPATLRWMVH DLPDKEEIVL QFAKSRNEQR VGFSRRMEDA SGVDLFIVSG
ALHYFEDELA VILGRLAELP RLVVVNRTPF SQADPIVTTQ VGDGYVHACK LHSLAGTIAG
MEAIGYRFVA KWPVHERASR VPLRPDLNDT YWGLFFVLDA DRRQLEASR
|
|---|
| |