Gene Rpal_3730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3730 
Symbol 
ID6411408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3991661 
End bp3992170 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content60% 
IMG OID642713612 
Productprotein of unknown function DUF892 
Protein accessionYP_001992705 
Protein GI192292100 
COG category[S] Function unknown 
COG ID[COG3685] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTTT TCAGCAAGGA CATTCAGACG ATGGAGGACC TGCTGCTGCA CGGCCTCCGC 
GACATCTATT ACGCCGAACA GCAGATCACC AAGGCGCTGC CAAAGATGAT CGAGCAGGCC
ACCAATCGCG ATCTGTCGCA GGGCCTGACA TCGCATCTGG AAGAGACCCA GAAGCAGATC
GAACGGCTCG ACCAAGTATT CAAGAAGCTC GGTCAGAAGC CCTCGGGGGT GAACTGCCCG
GCGATCGACG GCCTCATCAA GGAAGCCGAC GAGACCGCCG GCGAGATCGC CGACAAGACC
GTGCTGGACG CTGCGATCGT CGCCAATGCG CAGGCAGTCG AGCACTACGA GATTGCCCGC
TACGGCACCC TGATCGCCTG GGCCGAGGAG CTCGGCCACG ACGACATCGT CCGTTTCCTC
ACCACCAATC TCAACGAGGA AAAGGCCGCC AACACCAAGC TCAACACCGT GGCGCTCCGT
AAGGGCGTCA ATCGTAAAGC TGCAAGCTGA
 
Protein sequence
MGFFSKDIQT MEDLLLHGLR DIYYAEQQIT KALPKMIEQA TNRDLSQGLT SHLEETQKQI 
ERLDQVFKKL GQKPSGVNCP AIDGLIKEAD ETAGEIADKT VLDAAIVANA QAVEHYEIAR
YGTLIAWAEE LGHDDIVRFL TTNLNEEKAA NTKLNTVALR KGVNRKAAS