| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3724 |
|---|
| Symbol | |
|---|
| ID | 6411401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 3985978 |
|---|
| End bp | 3986403 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642713605 |
|---|
| Product | MaoC domain protein dehydratase |
|---|
| Protein accession | YP_001992699 |
|---|
| Protein GI | 192292094 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2030] Acyl dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.420067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCA CGATGGACAT GACCACTTCC CCCGCGGTCG GCGACCGTAT CGTCCACAAG
CGCTTCCCGG CGATCAATCG CCACCGCCTG GCGCTGTATT GCGGCGCCTC CGGCGATCAC
AATCCGATCC ATGTCGATAT CGACTTCGCC AAAGCGTCGG GTTTTCCCGA CGTGTTCACC
CACGGCATGC TGGTGATGGG CTATCTCGGC CAGGCACTCA GCGACGCGGT CCCGCCGGGC
CGGATCCGGA GCTTCTCGAC GCGATTTGCC GCGATCACCC AGCTCGGCGC CGAGATCACC
TGCGAAGGCC AGATCGCCGA GCTGATCGAA GCCGGCGGCG AACGCCGCGC CCGGCTCGCC
CTCACCGCCC GCGATCAGAC CGGCGAGATC AAACTCGCCG GTGAAGCGAT CGTCGCCCTG
TCATAA
|
|---|
| Protein sequence | MTGTMDMTTS PAVGDRIVHK RFPAINRHRL ALYCGASGDH NPIHVDIDFA KASGFPDVFT
HGMLVMGYLG QALSDAVPPG RIRSFSTRFA AITQLGAEIT CEGQIAELIE AGGERRARLA
LTARDQTGEI KLAGEAIVAL S
|
|---|
| |