| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3720 |
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| Symbol | |
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| ID | 6411397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3981956 |
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| End bp | 3983512 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713601 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001992695 |
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| Protein GI | 192292090 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.189603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCA CCCACGGCCT GCGGTGCGCG CTGCAGATCA ACCCGGAAGG GCTGGCCACC
GTCTGCGCCG GCCGCCGGCG TAACTGGCGC GAAGTCGGCG ACCGCGTTGC GCGGCTCGCT
GCCGGTCTGC GCGCCAGCGG CGTCGGCGAG GGCGAACGCG TCGCGATCCT GTCGCTGAAT
TCGGACCGCT ATCTGGAAAT GTATCTCGCC GCCGGCTGGT GCGGCGGCGT GATCGTGCCC
CTCAACATCC GCTGGAGCGC GCTGGAGAAC GAGGACGCCC TCAAGGACTG CCGCGCGGTG
GCGCTGGTGG TCGACAAGGC GTTCGCCGCG ACCGGCGCCG CGCTGGCGCA GGCGATGCCG
TCGATGGCGC TGATCTATGC CGACGACGGC GACGTTCCGG CCGGGATGCA AAGCTATGAG
GATCTGATCG CCACGCACGC GCCGATCCCG GATGCGATGC GCAAGGCCGA AGACCTCGCC
GGGATCTTCT ACACCGGTGG CACCACCGGC CGCTCCAAGG GCGTGATGCT GAGCCACGGC
AATCTGATGG CGAATGCACT CAACGCGCTG GGTGAGGGGC TGTTTCCCGG CACGTCTGTC
TATCTGCACG CCGCACCGAT GTTCCACCTC GCCAACGGCG CCGCGATGTA TTCGCTGCTG
CTGTCGGGCG GCTCGAACGT GATGATCCCG TCATTCACGC CGGAGGGCGT GATGCAGGCG
ATGCAGAACG ATCGGGTCAC CGACGTGCTG CTGGTGCCCA CCATGATCCA GATGTTCGTC
GATCATCCGG CGCTGAAGAA TTACGACCTG TCGTCGCTGA AGAACATCGT CTACGGCGCG
TCGCCGATCA GCGAGGCGGT GCTGGCCCGC GCGTCCGCGG CGCTGCCGAA CGTTCAGTTC
ACCCAGGCCT ACGGCATGAC CGAGCTGTCG CCGATCGCTA CGCTGCTGCA CTGGAAGGAG
CATATCGGCG AGGGCAAGGC CAAAGGCCGC CAGCGCGCCG CCGGCAGGGC GACGCTTGGC
TGCGAGGTCC GGATCGTCGA TGCCGATGAT CGCACCGTTC CTTATGGGAC GGTCGGCGAG
ATCTGCGTCC GCGGCGACAA CGTGATGATG GGCTATTGGG AGCGGCCTGA GGAGACCGCG
CGGGCGCTCG CGGGCGGCTG GATGCACACC GGCGACGGCG GCTACATGGA TGAGCACGGC
TTCGTCTACG TCGTCGACCG GGTCAAGGAT ATGATCATCT CCGGCGGTGA GAACGTGTAC
TCGGTCGAGG TCGAGAACGC GGTGGCGCAG CATCCGGCGG TGGCGCAATG CGCGGTGATC
GGTATTCCGC ACGAGGCGTG GGGCGAGCAG GTTCACGCCG TCGTCGTCAC CAAGGCCGGT
GCCACCGTGA CGGCGGAGGA GCTGATCGCC CACTGCAAGG CGTTGATCGC CGGCTACAAG
TGCCCGCGCA GTGTCGAGAT CACCGAGACG CCGCTGCCGC TGTCCGGCGC CGGCAAGATC
CTCAAGCGCG AACTGCGCCA GCCGTATTGG GAGAGCCGCG AACGTCGCGT CAGCTGA
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| Protein sequence | MNITHGLRCA LQINPEGLAT VCAGRRRNWR EVGDRVARLA AGLRASGVGE GERVAILSLN
SDRYLEMYLA AGWCGGVIVP LNIRWSALEN EDALKDCRAV ALVVDKAFAA TGAALAQAMP
SMALIYADDG DVPAGMQSYE DLIATHAPIP DAMRKAEDLA GIFYTGGTTG RSKGVMLSHG
NLMANALNAL GEGLFPGTSV YLHAAPMFHL ANGAAMYSLL LSGGSNVMIP SFTPEGVMQA
MQNDRVTDVL LVPTMIQMFV DHPALKNYDL SSLKNIVYGA SPISEAVLAR ASAALPNVQF
TQAYGMTELS PIATLLHWKE HIGEGKAKGR QRAAGRATLG CEVRIVDADD RTVPYGTVGE
ICVRGDNVMM GYWERPEETA RALAGGWMHT GDGGYMDEHG FVYVVDRVKD MIISGGENVY
SVEVENAVAQ HPAVAQCAVI GIPHEAWGEQ VHAVVVTKAG ATVTAEELIA HCKALIAGYK
CPRSVEITET PLPLSGAGKI LKRELRQPYW ESRERRVS
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