Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3719 |
Symbol | |
ID | 6411396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3980407 |
End bp | 3981792 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642713600 |
Product | hypothetical protein |
Protein accession | YP_001992694 |
Protein GI | 192292089 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.429536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTGC CTTTGAATGA CCAGTCCGTT CCGGCGCAAC TACAGGCAGC CTCCGGCGGG ATCGACTGGC AGCGTCGGGC TCTGCTGTTC GGTGCCGCGG CCACCGCTGG CGCCGCTGCT CTTGGCCTAA GCCCGGCATC GGCGGCCGTG CGGCGGCCGT CGTTGCGATC CGGGATCGAC CGGTCGGCGC GGGTCAGTGC GGCGCGGCTC GACGCCGAGG TCGCCAAGGC GTTCCCGCTG TTCAACGCGC CGGCAATCCT GCCGGCGTTC GATGCAGCGA CCGCCGGCGC CCAGGTGGAT GTCGATCTGC ACCGGATTGT GACTACGACC CGCGTCCCGG AGACCGGCGA ACGGCTGACG GTCAGCGGCC TGTTGGCCGT GCCGGCCGGC AAGACCGGCG AGCTGCCGCT GCTGTCGTGG CAGCACGGCA CCATCCTGTC GTTCGATCAG GTGCCGTCCA ACCTGACCAA GCTCGCCGAT CCGGCGTACC AGCTCAGCGA TACGGCGGAT TCGCTGGAGA CGTTGTTCAA CGTGCAGCGG TTCGCGGCGC GAGGCTATGC GGTGATCGCC GCCGACTATG TCGGCAAGGG CCCGTTCCGC AACGGGCGGG GCGAGAGCTA TGTGGTCAAA GACGTCAGCG TCCAGACCTG TCTCGACATG CTGGCGGCGG GCGAGGTGGC GATGAAGTCG CTCGGCCTCA GGCCTTCCAA ACTCTTCCTG CACGGCTGGT CGCAGGGCGC GCTCAATACC CAGTGGCTTC ATCAGGCGCT GCGCCGCCGG TCGCGGCCGA TCGCCGCGAC CGCGGTCGCC AGCCCGTTCA ACGATCTGAA TGAGGCCTGG AGCTATTGGG CCGGAGCGCA GAGCTTCGCG CTGCCGGCCG GCATGACGTC CTATCCGGCA CTGCCGAACT GGATCTCGCT GTGCATGATT GTCGCGCTCG GCAGTTACGA GCTGAACTAT CGCCTCAGCG GTCTGCTCGA CAGCGCCATC CGCCCCGAAT ACCGGGCGAT GGCCCGCAAA TACTGGGGTG ACTACAAGGT CGTGGCCGAT CCGCAGCAGC CGTTCCCGAC CGGCTCCGAC CTGTTGGTGC CGGGCTTCTT CGAGCGCGCC ACCGACGATC GCAACAGCGC CTTCCTGCGT CACCTCGCAG CCAATCGGGC TTCCTATTGG CGCTACGATT CGCCGATCCG GTTTCACTAT GGGCTCGCCG ACGAAGCGCT GCATCCGGCC ATGGTGTATC GGGCGCTGTC GGCTGGCGGT CACCAGGCGA TGGGGATCCC GACCGCCAGA GCCAGCCATC GCGCGACGTT TCTCGCTGCG CTGTATGGCG ATGCCGCCAG TCTCGGTGGT GCGGAGAATG TGCCGAGTTG GTTTGGCAAA TTCTAA
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Protein sequence | MPLPLNDQSV PAQLQAASGG IDWQRRALLF GAAATAGAAA LGLSPASAAV RRPSLRSGID RSARVSAARL DAEVAKAFPL FNAPAILPAF DAATAGAQVD VDLHRIVTTT RVPETGERLT VSGLLAVPAG KTGELPLLSW QHGTILSFDQ VPSNLTKLAD PAYQLSDTAD SLETLFNVQR FAARGYAVIA ADYVGKGPFR NGRGESYVVK DVSVQTCLDM LAAGEVAMKS LGLRPSKLFL HGWSQGALNT QWLHQALRRR SRPIAATAVA SPFNDLNEAW SYWAGAQSFA LPAGMTSYPA LPNWISLCMI VALGSYELNY RLSGLLDSAI RPEYRAMARK YWGDYKVVAD PQQPFPTGSD LLVPGFFERA TDDRNSAFLR HLAANRASYW RYDSPIRFHY GLADEALHPA MVYRALSAGG HQAMGIPTAR ASHRATFLAA LYGDAASLGG AENVPSWFGK F
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