Gene Rpal_3711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3711 
Symbol 
ID6411388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp3971456 
End bp3972118 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID642713592 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001992686 
Protein GI192292081 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCG ACACCACACG CAGTGCCATC CTGACCGCCG CCGAACGGCT GTATGCCGAA 
CGCGGCTTCG GCGACGTGAC GTTGCGCGAC ATCGTCGCCG CAGCGGGCGT CAACCTCGCC 
GCAGTGAACT ATCACTTCGG CTCCAAGGAC GAGCTGATCG CCGAGCTGTT CGTGACGCGG 
TCGATCGTCA CCAACCGCGA GCGGCTCAAC GAACTGAAGG CGGCGGAAGC TGCCGGCGGC 
GGCCGCGCAC CGATTGAAGC GGTGCTACGC GCGCTGGTCG GCCCGACCCT GCGCGGCTGC 
CTCGGCCCGG ACAGTCAGCG CTCGGATGCC GCGCGCTTCA TGATCCGCGC CGCGATCGAA 
ACCATCCCGC CGATCCGCAA GATCAAGAAT CGCGAGATCG ATCACTTGCG CAAATTCGCC 
GCGGCAATGC GGCGCTCGCT GCCCGGCAAG CCGGACGCGG AGATCTATTG GGGCCTGCAC 
TTCGCGCTGG CGATGGCGCA GCAGACCGTG CGCGACAGCG AGCGCCTGCT GCGGCTGTCG 
GAAGGCATCT GCGATCTCGA CGATGTCGAC GGCGTCATCG ACCGCGTCGT CGCGGTCGCG 
TCGCTGGCGC TGAAGATGGG CACCGTCGGC ACCAGCGAGG TTGCGGTGTC GTGGCGGCGC 
TGA
 
Protein sequence
MSTDTTRSAI LTAAERLYAE RGFGDVTLRD IVAAAGVNLA AVNYHFGSKD ELIAELFVTR 
SIVTNRERLN ELKAAEAAGG GRAPIEAVLR ALVGPTLRGC LGPDSQRSDA ARFMIRAAIE 
TIPPIRKIKN REIDHLRKFA AAMRRSLPGK PDAEIYWGLH FALAMAQQTV RDSERLLRLS 
EGICDLDDVD GVIDRVVAVA SLALKMGTVG TSEVAVSWRR