Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3711 |
Symbol | |
ID | 6411388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3971456 |
End bp | 3972118 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642713592 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001992686 |
Protein GI | 192292081 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACCG ACACCACACG CAGTGCCATC CTGACCGCCG CCGAACGGCT GTATGCCGAA CGCGGCTTCG GCGACGTGAC GTTGCGCGAC ATCGTCGCCG CAGCGGGCGT CAACCTCGCC GCAGTGAACT ATCACTTCGG CTCCAAGGAC GAGCTGATCG CCGAGCTGTT CGTGACGCGG TCGATCGTCA CCAACCGCGA GCGGCTCAAC GAACTGAAGG CGGCGGAAGC TGCCGGCGGC GGCCGCGCAC CGATTGAAGC GGTGCTACGC GCGCTGGTCG GCCCGACCCT GCGCGGCTGC CTCGGCCCGG ACAGTCAGCG CTCGGATGCC GCGCGCTTCA TGATCCGCGC CGCGATCGAA ACCATCCCGC CGATCCGCAA GATCAAGAAT CGCGAGATCG ATCACTTGCG CAAATTCGCC GCGGCAATGC GGCGCTCGCT GCCCGGCAAG CCGGACGCGG AGATCTATTG GGGCCTGCAC TTCGCGCTGG CGATGGCGCA GCAGACCGTG CGCGACAGCG AGCGCCTGCT GCGGCTGTCG GAAGGCATCT GCGATCTCGA CGATGTCGAC GGCGTCATCG ACCGCGTCGT CGCGGTCGCG TCGCTGGCGC TGAAGATGGG CACCGTCGGC ACCAGCGAGG TTGCGGTGTC GTGGCGGCGC TGA
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Protein sequence | MSTDTTRSAI LTAAERLYAE RGFGDVTLRD IVAAAGVNLA AVNYHFGSKD ELIAELFVTR SIVTNRERLN ELKAAEAAGG GRAPIEAVLR ALVGPTLRGC LGPDSQRSDA ARFMIRAAIE TIPPIRKIKN REIDHLRKFA AAMRRSLPGK PDAEIYWGLH FALAMAQQTV RDSERLLRLS EGICDLDDVD GVIDRVVAVA SLALKMGTVG TSEVAVSWRR
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