| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3701 |
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| Symbol | |
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| ID | 6411377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3960674 |
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| End bp | 3961204 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713581 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001992676 |
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| Protein GI | 192292071 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.266091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGATT TGACCGAGAG TCTGGCGCAT CTCTATGTCG ACGAGCATCG GCGGCTTCAG
CGGTTTCTGA TTGCCCGCGG ACTGTCTGCG AGCGCTGCCG CCGACATCGT GCAGGAGGCT
TTCCTACGCC TGCTGCGTGC GCCGCGCGAA GAGGTCCGTG ACCTCCGCAG CTATCTGTTT
CGGACCACCG ACAATCTGGC GATCGACGAA GCCCGCCGGC GTCGTCGCAA TATATTGGCA
ACGGCGGTCG AACTCGACGA AGCGATCGCC GACCCGTCGC CGCTGCCCGA TGCGGTGCTG
ATTTCCCACC AGGAATTCCG AGCGTTGCAC GCTGCACTGG CCGCATTGCC GCCGCGCCCC
CGCGAAGTGT TGATTCTCCA CAAGTTCGAA GGAATGAGCT ACGCCGACAT CGCCGAACGG
CTCGGAATCT CGAAAAATAC CGTGATGGCG CACATGTTGA GAGCGATGCT TTGCCTCAAG
GCCAGCTTCT CGGCAGAGGG GGGCGGTGCG GACGGCTCGT CGATCCGGTG A
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| Protein sequence | MTDLTESLAH LYVDEHRRLQ RFLIARGLSA SAAADIVQEA FLRLLRAPRE EVRDLRSYLF
RTTDNLAIDE ARRRRRNILA TAVELDEAIA DPSPLPDAVL ISHQEFRALH AALAALPPRP
REVLILHKFE GMSYADIAER LGISKNTVMA HMLRAMLCLK ASFSAEGGGA DGSSIR
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