| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3696 |
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| Symbol | |
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| ID | 6411372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3953734 |
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| End bp | 3954183 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642713576 |
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| Product | Biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_001992671 |
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| Protein GI | 192292066 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGACA GCGTGAGAGA GTATGGCGGC GGCCAGTTCG ATGACGATCG TGGCACCAAG
GTGCCCCCGT TCATTGACGT AATTCTAGTG CTCCTCATCA TCTTCATGGT CGCGGCGCCA
CTCGCGACGG CTCATGTTGA TCTCGGTTTG CTGGCGTGGA CAGCGAAATC GACGCCGCGA
GTCGGCAAGC CACTCTATGT CACTCTGAAC AGTGACCACA CGCTACGTAT CGACGACAGC
CCGGTCGCCC GCGAGCATCT ACGGGCGATC ATCGATCGCA AGGCCGGCGG CGACAAGAAA
ACCCGTGTCT TCGTTAGCGC GGACAGCAGG GTCGATTATG GAAGTCTGAT GGAGGTGGTG
AATCTGCTGT GCGGCGCCGG CTATCTCAAA GTTACGCTGG TCGGTCTCGA GCAAGTGGCC
GTGCTACCTG CGCCCGCGTC CGTGCCGTGA
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| Protein sequence | MADSVREYGG GQFDDDRGTK VPPFIDVILV LLIIFMVAAP LATAHVDLGL LAWTAKSTPR
VGKPLYVTLN SDHTLRIDDS PVAREHLRAI IDRKAGGDKK TRVFVSADSR VDYGSLMEVV
NLLCGAGYLK VTLVGLEQVA VLPAPASVP
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