| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3695 |
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| Symbol | |
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| ID | 6411371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3952889 |
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| End bp | 3953737 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642713575 |
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| Product | TonB family protein |
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| Protein accession | YP_001992670 |
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| Protein GI | 192292065 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGACT TCAACAGCTC GATCAGTCGC CGGACCAAAG CTCTCGAAAT GTTCGGTTGG
TCGGTGGCGG CGCTGCTGAT GATGGGGGCA CATGCCGGCG CCGTGGCCTG GATGCTGCTG
CCCGATCCGG TGGTCCCCGC GGAGGACTCG GCACCGGCCG CCATCATGGT GGACATGGCG
GCGGTGCCCG AAGCGATCGT CACGGCGAGA ACCGATATCT CACCGGACCA GAAATCGGCC
GATGACAGCC GGCCGCAAGC AGAGCAACGG CAGGAGCCGC CGCCGCAGCT CGCCGAGCCG
CCGGTCGAGC CGAATGAAAC AGCGCCGGTC GAGCAGACCA AGACGGAGGA CAGGCCGCCG
GTCGTCGAGA CTGCGGAGGT GCCACTTCCG CGTCCCGAAC CTCCCCGGGC GGTGACGCCC
CCGGAGCCAA AGCCGACGCC GAAGAAGAAG CAGCGCTCAC GCCCGCAGCG GGCTGCGGCC
AATTCCCAGG CAATGCGGCA GGCGCAGCTC GAGGCGAGGC AGTCGGATCG GATAGCGGCT
GCTCAGACCG CGTTCGGTGG GGCTTCGCAG TCCCCGGCGG ATTGGCGGTC ACGGCTGATG
GCGCATCTGC AGCGTAGCAA GCGCTCGGTG TCGGCGGCCG CTGACCAGGG GAGGCGCCGG
ATCGCCCATG TGCACTTTGC GATCGATCAG TCGGGAAATG TGCGGTCGGT GAGATTGGTG
CGGTCGTCGG GCTTCGCCGA GATCGACCGG GAGGCGCTCG CGCTGGTGCA GCGCGCATCT
CCGGTTCCGC CGCCGCCGCC CGGTGCGAGC CGGAGCCTGA CGGTGCCGGT CGGATTTGTC
TCGGACTAG
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| Protein sequence | MTDFNSSISR RTKALEMFGW SVAALLMMGA HAGAVAWMLL PDPVVPAEDS APAAIMVDMA
AVPEAIVTAR TDISPDQKSA DDSRPQAEQR QEPPPQLAEP PVEPNETAPV EQTKTEDRPP
VVETAEVPLP RPEPPRAVTP PEPKPTPKKK QRSRPQRAAA NSQAMRQAQL EARQSDRIAA
AQTAFGGASQ SPADWRSRLM AHLQRSKRSV SAAADQGRRR IAHVHFAIDQ SGNVRSVRLV
RSSGFAEIDR EALALVQRAS PVPPPPPGAS RSLTVPVGFV SD
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