| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3691 |
|---|
| Symbol | rplA |
|---|
| ID | 6411367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 3950477 |
|---|
| End bp | 3951166 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642713571 |
|---|
| Product | 50S ribosomal protein L1 |
|---|
| Protein accession | YP_001992666 |
|---|
| Protein GI | 192292061 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCG GTAAGCGTCT GAAGAAGATC CGGGAAGGCA TCGACCGCAC CAAGCTTTAT
CCGCTCGACG AGGCGGTGAA GCTGGTCAAG GAGCGCGCCA TCTCGAAGTT CGACGAGACC
ATCGAGGTCG CGATCAACCT CGGCGTCGAT CCGCGCCACG CTGACCAGAT GGTCCGCGGC
GTGGTCATGC TGCCGAACGG CACCGGCCGC ACCGTGCGCG TCGGCGTGTT CGCGCGCGGC
GCCAAGGCGG ACGAAGCCAA GGCCGCGGGC GCCGACGTCG TCGGCGCGGA GGATCTGGTG
GAGCAGGTTC AGGCCGGCAA CATCAACTTC GACCGCTGCA TCGCGACCCC GGACATGATG
CCCCTGGTCG GCCGCCTCGG TAAGGTGCTC GGCCCGCGCG GCATGATGCC GAACCCGAAG
ATCGGCACGG TGACCATGGA TGTCGCCGGC GCGGTCAAGG GCGCCAAGGG CGGTTCGGTC
GAGTTCCGCG TCGAGAAGGC CGGTATCATC CAGGCTGGCG TCGGCAAGGC CTCGTTCGAT
GCCGACAAGC TGGTGGAGAA CATCAAGGCG CTTGCGGACG CGGTCAACAA GGCCAAGCCG
ACCGGCGCCA AGGGCACCTA CATTCAGCGC GTCGCGGTGT CCTCGACCAT GGGCCCGGGC
GTGAAGGTCG AGCCGGGCAC CGTCCACTAA
|
|---|
| Protein sequence | MAIGKRLKKI REGIDRTKLY PLDEAVKLVK ERAISKFDET IEVAINLGVD PRHADQMVRG
VVMLPNGTGR TVRVGVFARG AKADEAKAAG ADVVGAEDLV EQVQAGNINF DRCIATPDMM
PLVGRLGKVL GPRGMMPNPK IGTVTMDVAG AVKGAKGGSV EFRVEKAGII QAGVGKASFD
ADKLVENIKA LADAVNKAKP TGAKGTYIQR VAVSSTMGPG VKVEPGTVH
|
|---|
| |