| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3690 |
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| Symbol | |
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| ID | 6411366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3949427 |
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| End bp | 3950377 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642713570 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001992665 |
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| Protein GI | 192292060 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACA AGGTTCTGGT GGCGTCGCGG TTTGGCCGGT CGATGCTGGG GAGATTCGCC
GAGCAGTTCG AGCTGCTGGA GACCGCCGGC AAGCCTGCTG ATCAGGTTTT CAGTGCCACT
GAGCTCGCCG ACGTCCGCGC GCTGCTGACG ATGGGCGGCC AGCCGCTCGG CCGCGAGACC
TTCGACATGC TCCCGGCGCT CGGCGCGGTG GTCTGCTACG GCACCGGCTA CGACGGGGTC
GATCTGAAAG CCGCGGCCGA GCGCGGCATC GTGGTCGGCA ACAGCCCGGC GGCGAATGCC
TCGGCGGTCG CCGATCTGGC GCTGGCGCTG TTGCTCGCTT TGATGCGCCG CGTGCTGCCG
GCCGACGCTT ACGTGCGGGC CGGGGGCTGG TCCGGCGCCA AGCCGTCGCC GATGCTGAAG
CCGCCGCGCG GACTGACCGG CGCTAAGGTC GGCGTGTATG GCATCGGCGA GATCGGCCGC
AAGATCGCCG CCCGCGTCGC CGGCTTCGAG ACCGAAGTCG CCTATCACAG CCGCAGCCGT
CACGACGTGC CGTATCGCTA TGTCGGCGAT CTCGGCGAAT TGGTCGACTG GTGCGACGTG
CTGCTGGTCG CGGTCCGCGC CGGCCCGGAT ACCGAGAAGA TCATCGATGC CGGCATGCTG
AAGCGGCTCG GGCCGAGCGG CGTGGTGGTC AACATCTCCC GCGGTTCGGT GATCGATCAG
GCCGCGCTGA TCGCCGCGCT GGCCGACGGC ACGATCGCCG GGGCCGGTCT CGACGTCTTC
GCCCTGGAGC CCTACGCGCC GGATGCGCTG GCCGAGTTTC CGAACGTGGT GCTGACGCCG
CATATCGGCG GTCACACCCA GGAAGCCCAC CGCGCGATGC AGGACTGCGT CATCGCCAAT
CTCGCGGCGT TCTTCGCGGG GAAGCCGCTG CCATATCCGG TGCAGGCGTA A
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| Protein sequence | MADKVLVASR FGRSMLGRFA EQFELLETAG KPADQVFSAT ELADVRALLT MGGQPLGRET
FDMLPALGAV VCYGTGYDGV DLKAAAERGI VVGNSPAANA SAVADLALAL LLALMRRVLP
ADAYVRAGGW SGAKPSPMLK PPRGLTGAKV GVYGIGEIGR KIAARVAGFE TEVAYHSRSR
HDVPYRYVGD LGELVDWCDV LLVAVRAGPD TEKIIDAGML KRLGPSGVVV NISRGSVIDQ
AALIAALADG TIAGAGLDVF ALEPYAPDAL AEFPNVVLTP HIGGHTQEAH RAMQDCVIAN
LAAFFAGKPL PYPVQA
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