| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3667 |
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| Symbol | rplC |
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| ID | 6411343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3915730 |
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| End bp | 3916455 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713547 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001992642 |
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| Protein GI | 192292037 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCTCCG GAGTGATCGC ACAGAAGGTC GGGATGACGC GGGTCTTTAC AGAGGCCGGC
GAGCATATCC CTGTGACCGT GCTGAAGCTT GGCAATTGCC AGGTGTTGGG CCACCGCACC
AAAGAGAAGA ACGGCTACGT GGCGCTGCAG GTCGGCTCCG GCTCGCGCAA GACGGTTTAT
ATGCCGAAGG CCGAGCGCGG TCAGTTTGCC GCCGCCAAGG TCGAGCCGAA GCGTAAGGTC
GAGGAGTTCC GCGTTTCTGA GGATGCGCTG CTCCCGGTCG GCGCCGAGAT CCAGGCCGAT
CACTTCGTCG TCGGCCAGTT CGTCGACGTA ACCGGCACTT CGACCGGTAA GGGCTTCGCC
GGCGGTATGA AGCGCTGGAA CTTCGGCGGT CTTCGCGCCA CGCACGGCGT GTCGGTGTCG
CACCGCTCGA TCGGTTCGAC CGGTGGTCGT CAGGACCCCG GCAAGACCTT CAAGAACAAG
AAGATGCCGG GCCACATGGG CGTCGATCGC GTCACCACGC TGAACCTGCG GGTGGTGCAG
ACCGATGTCG AGCGCGGGCT GATCCTGGTC GAGGGCGCTG TGCCCGGCAC CAAGGGTGGC
TGGATCCGCG TGCGTGACGC GGTGAAGAAG GCGCTGCCGG CGGATGCGCC GAAGCCGGGC
AAGTTCCGGC TCGCCAATGG CGATGCGGCT GCGGAAGCGC CGGCTGCCGA GCAGGAAGGT
GCGTGA
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| Protein sequence | MRSGVIAQKV GMTRVFTEAG EHIPVTVLKL GNCQVLGHRT KEKNGYVALQ VGSGSRKTVY
MPKAERGQFA AAKVEPKRKV EEFRVSEDAL LPVGAEIQAD HFVVGQFVDV TGTSTGKGFA
GGMKRWNFGG LRATHGVSVS HRSIGSTGGR QDPGKTFKNK KMPGHMGVDR VTTLNLRVVQ
TDVERGLILV EGAVPGTKGG WIRVRDAVKK ALPADAPKPG KFRLANGDAA AEAPAAEQEG
A
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